RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DHX15O43143 795 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 TACC1O75410 805 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 ATG7O95352 703 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 SSBP05455 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 KRT18P05783 430 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 ZNF286BP0CG31 522 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 EIF4A3P38919 411 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 ITGB3BPQ13352 177 aaPredicted RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 PPP2R5CQ13362 524 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 FAM47CQ5HY64 1035 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 HABP4Q5JVS0 413 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 BEND6Q5SZJ8 279 aaPredicted RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 HGSNATQ68CP4 663 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 MFSD5Q6N075 450 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 CCDC155Q8N6L0 562 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 C7orf31Q8N865 590 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 GJA10Q969M2 543 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 IFIH1Q9BYX4 1025 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 UBE2OQ9C0C9 1292 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 JPH1Q9HDC5 661 aaPredicted RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 PLCB1Q9NQ66 1216 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 OLFML3Q9NRN5 406 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 FAM207AQ9NSI2 230 aaPredicted RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 TBC1D22BQ9NU19 505 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 TRMT13Q9NUP7 481 aaKnown RBP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 GTF2IRD1Q9UHL9 959 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 TELO2Q9Y4R8 837 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 PCDHA13Q9Y5I0 950 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPRD-207ENST00000463477 UBE4BO95155 1302 aa10.8□□□□□ -0.68
PTPRD-207ENST00000463477 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 EIF3DO15371 548 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SLC16A3O15427 465 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 NOL4O94818 638 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 ATP1A1P05023 1023 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SERPING1P05155 500 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 ANXA13P27216 316 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 TCF7P36402 384 aaPredicted RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SP4Q02446 784 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 NCAPH2Q6IBW4 605 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SLC5A5Q92911 643 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 ZNF577Q9BSK1 485 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 FGFBP2Q9BYJ0 223 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 TYW1Q9NV66 732 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 AIPL1Q9NZN9 384 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 KCND2Q9NZV8 630 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 PKD2L1Q9P0L9 805 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 HDAC6Q9UBN7 1215 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 FBXL5Q9UKA1 691 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 WDR81Q562E7 1941 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 GTPBP10A4D1E9 387 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 CALUO43852 315 aaPredicted RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 AKR1B10O60218 316 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 LGR5O75473 907 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 PSMD10O75832 226 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SASH3O75995 380 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SEC31AO94979 1220 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 HOXC8P31273 242 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 ACTR2P61160 394 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 ADAM9Q13443 819 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 PTGISQ16647 500 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SFMBT2Q5VUG0 894 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 GDF6Q6KF10 455 aaPredicted RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 HDXQ7Z353 690 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 TDHQ8IZJ6 230 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 TMEM199Q8N511 208 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 PNKPQ96T60 521 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 HSD17B14Q9BPX1 270 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
PTPRD-207ENST00000463477 REEP2Q9BRK0 252 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 GANQ9H2C0 597 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 RNPEPQ9H4A4 650 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 DEF6Q9H4E7 631 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SMARCAD1Q9H4L7 1026 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 SEL1LQ9UBV2 794 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 L1RE1Q9UN81 338 aa10.79□□□□□ -0.68
PTPRD-207ENST00000463477 IGKV6D-21A0A0A0MT36 114 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 NPHP3-ACAD11A0A0J9YXS1 232 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PITPNM1O00562 1244 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PLEKP08567 350 aaPredicted RBP10.78□□□□□ -0.68
PTPRD-207ENST00000463477 CYP2C9P11712 490 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 RPL13P26373 211 aaKnown RBP10.78□□□□□ -0.68
PTPRD-207ENST00000463477 CYP27A1Q02318 531 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 FPGSQ05932 587 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 C10orf76Q5T2E6 689 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PLPPR4Q7Z2D5 763 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 NEK9Q8TD19 979 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 ALS2CR12Q96Q35 445 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PCYT2Q99447 389 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms