RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZNF839A8K0R7 811 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 SEC24DO94855 1032 aaPredicted RBP6.93□□□□□ -1.3
COPS3-205ENST00000463097 PAPLNO95428 1278 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 TSHRP16473 764 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 FMO1Q01740 532 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 PFKPQ01813 784 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 BLMHQ13867 455 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 SIM2Q14190 667 aaPredicted RBP6.93□□□□□ -1.3
COPS3-205ENST00000463097 PLS1Q14651 629 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 SEPT2Q15019 361 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 PUM3Q15397 648 aaKnown RBP6.93□□□□□ -1.3
COPS3-205ENST00000463097 PGBD2Q6P3X8 592 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 TEPPQ6URK8 271 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 HEATR3Q7Z4Q2 680 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 BMP8AQ7Z5Y6 402 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 SLC51AQ86UW1 340 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 LIX1LQ8IVB5 337 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 FAM126BQ8IXS8 530 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 SYTL1Q8IYJ3 562 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 CCDC33Q8N5R6 958 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPS3-205ENST00000463097 IGDCC4Q8TDY8 1250 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 TMEM41AQ96HV5 264 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 MPP4Q96JB8 637 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 FAM167AQ96KS9 214 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 TBATAQ96M53 351 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 OR10A5Q9H207 317 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 PNPLA8Q9NP80 782 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 TDP1Q9NUW8 608 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 PNPOQ9NVS9 261 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPS3-205ENST00000463097 PCDHA3Q9Y5H8 950 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 USP19O94966 1318 aa6.93□□□□□ -1.3
COPS3-205ENST00000463097 ISM1B1AKI9 464 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 MYO1FO00160 1098 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 DDX3XO00571 662 aaKnown RBP eCLIP6.92□□□□□ -1.3
COPS3-205ENST00000463097 IL18RAPO95256 599 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 ARIH2O95376 493 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 KITP10721 976 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 CD8BP10966 210 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 MAPK9P45984 424 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 MGAT5Q09328 741 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 DAG1Q14118 895 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 CNGA2Q16280 664 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 KHDC1Q4VXA5 237 aaKnown RBP6.92□□□□□ -1.3
COPS3-205ENST00000463097 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 JAKMIP3Q5VZ66 844 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 PROSER1Q86XN7 944 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 MIB1Q86YT6 1006 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 RNF152Q8N8N0 203 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 WDR48Q8TAF3 677 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
COPS3-205ENST00000463097 GCC1Q96CN9 775 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 DCAF5Q96JK2 942 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 COLEC11Q9BWP8 271 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
COPS3-205ENST00000463097 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
COPS3-205ENST00000463097 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
COPS3-205ENST00000463097 A0A0A6YYK5 440 aaPredicted RBP6.91□□□□□ -1.3
COPS3-205ENST00000463097 PARP1P09874 1014 aaKnown RBP6.91□□□□□ -1.3
COPS3-205ENST00000463097 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 TYRP14679 529 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SLC7A1P30825 629 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 PPFIA1Q13136 1202 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 PMS2P11Q13670 270 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 STARD3Q14849 445 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 MSMPQ1L6U9 139 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SH2D3CQ8N5H7 860 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 ZNF527Q8NB42 609 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 MRGPRX4Q96LA9 322 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SAMD11Q96NU1 681 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SOX7Q9BT81 388 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 RBPJLQ9UBG7 517 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SLC5A6Q9Y289 635 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 SCINQ9Y6U3 715 aa6.91□□□□□ -1.3
COPS3-205ENST00000463097 M0R3H8 397 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 APOL1O14791 398 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 AKR1B10O60218 316 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 ENDOD1O94919 500 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 AGR2O95994 175 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 HPXP02790 462 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 CSTBP04080 98 aaKnown RBP6.9□□□□□ -1.3
COPS3-205ENST00000463097 THP07101 528 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 BRAFP15056 766 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 STAT5AP42229 794 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 HSPA7P48741 367 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 GALK1P51570 392 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 ERVFC1P60507 584 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 PRR5P85299 388 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 NR1I3Q14994 352 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms