RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 A0A1B0GUA9 196 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 RBAK-RBAKDNI3L0D1 243 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 M0QZ92 97 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CLIC2O15247 247 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CALUO43852 315 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 TOM1L1O75674 476 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 NR3C1P04150 777 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CTSHP09668 335 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 ARF4P18085 180 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 GARTP22102 1010 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 BFSP2Q13515 415 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 PRPF4BQ13523 1007 aaKnown RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 EEF1DP3Q658K8 133 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 FILIP1Q7Z7B0 1213 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CSGALNACT2Q8N6G5 542 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 FBXL18Q96ME1 805 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CEP63Q96MT8 703 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 SCLT1Q96NL6 688 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 TSG101Q99816 390 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 CBWD1Q9BRT8 395 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 SRRTQ9BXP5 876 aaKnown RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 AGO3Q9H9G7 860 aaKnown RBP15.71■□□□□ 0.11
COL6A1-202ENST00000463060 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 GINS2Q9Y248 185 aa15.71■□□□□ 0.11
COL6A1-202ENST00000463060 HNRNPDLO14979 420 aaKnown RBP15.7■□□□□ 0.1
COL6A1-202ENST00000463060 FAM189A1O60320 539 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 SELPP16109 830 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 AXLP30530 894 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 LIG4P49917 911 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 MCL1Q07820 350 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 ADAM9Q13443 819 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 LPIN1Q14693 890 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 SLFN12LQ6IEE8 588 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 CCDC155Q8N6L0 562 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
COL6A1-202ENST00000463060 BORCS6Q96GS4 357 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 THAP9Q9H5L6 903 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 AGPAT5Q9NUQ2 364 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 ST3GAL5Q9UNP4 418 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 ATP11BQ9Y2G3 1177 aa15.7■□□□□ 0.1
COL6A1-202ENST00000463060 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 LRRC10BA6NIK2 292 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 BECN2A8MW95 431 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 SLC34A2O95436 690 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 SFPQP23246 707 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL6A1-202ENST00000463060 NR2F2P24468 414 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
COL6A1-202ENST00000463060 MARSP56192 900 aaKnown RBP15.69■□□□□ 0.1
COL6A1-202ENST00000463060 GSE1Q14687 1217 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 ATF7IP2Q5U623 682 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 CATSPER4Q7RTX7 472 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 APTXQ7Z2E3 356 aaKnown RBP15.69■□□□□ 0.1
COL6A1-202ENST00000463060 ZSWIM2Q8NEG5 633 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 HSPBP1Q9NZL4 362 aa15.69■□□□□ 0.1
COL6A1-202ENST00000463060 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 KIAA0391O15091 583 aaKnown RBP15.68■□□□□ 0.1
COL6A1-202ENST00000463060 CETN3O15182 167 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 RPS6KA5O75582 802 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 AKAP3O75969 853 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 ERLIN2O94905 339 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 CLTBP09497 229 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 CASP4P49662 377 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 RGS19P49795 217 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 MLLT1Q03111 559 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-202ENST00000463060 DSC3Q14574 896 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 ARMCX5Q6P1M9 558 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 MPZL3Q6UWV2 235 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 CRELD2Q6UXH1 353 aaPredicted RBP15.68■□□□□ 0.1
COL6A1-202ENST00000463060 LRRC8DQ7L1W4 858 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 POMGNT1Q8WZA1 660 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 VWCEQ96DN2 955 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 BICD1Q96G01 975 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 CPB2Q96IY4 423 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 PCIF1Q9H4Z3 704 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 PADI3Q9ULW8 664 aa15.68■□□□□ 0.1
COL6A1-202ENST00000463060 TRIM43BA6NCK2 446 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 GPR182O15218 404 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 MAPK13O15264 365 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 CLDN3O15551 220 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 AP5Z1O43299 807 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 NBNO60934 754 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 FGFR1OPO95684 399 aaKnown RBP15.67■□□□□ 0.1
COL6A1-202ENST00000463060 MCF2P10911 925 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 GHRP10912 638 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 ATP1A3P13637 1013 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 CD52P31358 61 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 CDR2LQ86X02 465 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-202ENST00000463060 XXYLT1Q8NBI6 393 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 TRIM43Q96BQ3 446 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-202ENST00000463060 TRAIPQ9BWF2 469 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 CDT1Q9H211 546 aa15.67■□□□□ 0.1
COL6A1-202ENST00000463060 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms