RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 DENND2AQ9ULE3 1009 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 IRS2Q9Y4H2 1338 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 ARFGEF1Q9Y6D6 1849 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ARAP2Q8WZ64 1704 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 CCDC171Q6TFL3 1326 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 FAM47E-STBD1D6RA91 191 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ARVCFO00192 962 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 PAX4O43316 350 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 DGKIO75912 1065 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 HSPA4P34932 840 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ADD2P35612 726 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 MESP2Q0VG99 397 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 SLC9C2Q5TAH2 1124 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 CCDC129Q6ZRS4 1044 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ZNF804AQ7Z570 1209 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ZNF589Q86UQ0 364 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-204ENST00000462658 DCP2Q8IU60 420 aaKnown RBP8.66□□□□□ -1.02
UBE4B-204ENST00000462658 FBXO15Q8NCQ5 510 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-204ENST00000462658 TBC1D16Q8TBP0 767 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 PIP4K2CQ8TBX8 421 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 MAP4K1Q92918 833 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 PEX11GQ96HA9 241 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 POLLQ9UGP5 575 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 NUDT5Q9UKK9 219 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 AK9Q5TCS8 1911 aa8.66□□□□□ -1.02
UBE4B-204ENST00000462658 ABLIM1O14639 778 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 DNAJC8O75937 253 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 ANAPC15P60006 121 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 ZNF200P98182 395 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 TMEM62Q0P6H9 643 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 BECN1Q14457 450 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 DPP8Q6V1X1 898 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 GPR101Q96P66 508 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-204ENST00000462658 SIRT5Q9NXA8 310 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 ABCF2Q9UG63 623 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 PALD1Q9ULE6 856 aa8.65□□□□□ -1.02
UBE4B-204ENST00000462658 SBF1O95248 1867 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 MAST3O60307 1309 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 PDS5AQ29RF7 1337 aaKnown RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 ZNF532Q9HCE3 1301 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 TCRBV16S1A1N1A0A5B0 115 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 M0R2C6 588 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 NKRFO15226 690 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 PEX10O60683 326 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 PYGMP11217 842 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 GNAT1P11488 350 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 PDE6AP16499 860 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 SLC6A11P48066 632 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 NCKAP1LP55160 1127 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 CHAF1AQ13111 956 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 RABEP1Q15276 862 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 STEAP3Q658P3 488 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 OTOP3Q7RTS5 596 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 SYNPOQ8N3V7 929 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 MAGEB6Q8N7X4 407 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 SEC14L1Q92503 715 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 PUS7LQ9H0K6 701 aaKnown RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 AP5M1Q9H0R1 490 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 CNTD2Q9H8S5 307 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 CD209Q9NNX6 404 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 RAI14Q9P0K7 980 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 MBD1Q9UIS9 605 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 RBM8AQ9Y5S9 174 aaKnown RBP8.64□□□□□ -1.03
UBE4B-204ENST00000462658 AKAP11Q9UKA4 1901 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 CACNA1SQ13698 1873 aa8.64□□□□□ -1.03
UBE4B-204ENST00000462658 A0A1B0GUL6 1792 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 A0A0G2JLW4 131 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 TCRBV5S4A2TA0A5A2 114 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 HRKO00198 91 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 IL1R1P14778 569 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 DPEP1P16444 411 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 ZKSCAN1P17029 563 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 DNM2P50570 870 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 PRELPP51888 382 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 RBM10P98175 930 aaKnown RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 ZNF460Q14592 562 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 PLEKHG4Q58EX7 1191 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 CREB3L3Q68CJ9 461 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 ABHD17CQ6PCB6 329 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 SYDE1Q6ZW31 735 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 MILR1Q7Z6M3 343 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 KIAA0907Q7Z7F0 614 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 RBM12BQ8IXT5 1001 aaKnown RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
UBE4B-204ENST00000462658 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 ALG3Q92685 438 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 SNX21Q969T3 373 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 FBXW5Q969U6 566 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 IL17RAQ96F46 866 aa8.63□□□□□ -1.03
UBE4B-204ENST00000462658 TSPAN17Q96FV3 270 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms