RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TAOK1Q7L7X3 1001 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 MKL1Q969V6 931 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 WDR18Q9BV38 432 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 STMN4Q9H169 189 aaPredicted RBP19.84■□□□□ 0.77
HPS3-204ENST00000462030 SIPA1L1O43166 1804 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 CFAP73A6NFT4 308 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 FOXO6A8MYZ6 492 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 CACNB3P54284 484 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 SIX1Q15475 284 aaPredicted RBP19.83■□□□□ 0.77
HPS3-204ENST00000462030 MFSD5Q6N075 450 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 FMNL3Q8IVF7 1028 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 DYDC1Q8WWB3 177 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 CCDC17Q96LX7 622 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 PCDHB18PQ96TA0 734 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 CDC42EP4Q9H3Q1 356 aaKnown RBP19.83■□□□□ 0.77
HPS3-204ENST00000462030 MLXIPLQ9NP71 852 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 QSER1Q2KHR3 1735 aa19.83■□□□□ 0.77
HPS3-204ENST00000462030 EMSYQ7Z589 1322 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 TCP11X1B4DZS4 312 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 ACSL3O95573 720 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 GBP2P32456 591 aaPredicted RBP19.83■□□□□ 0.76
HPS3-204ENST00000462030 PDE6CP51160 858 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 MYO1EQ12965 1108 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 RIPK1Q13546 671 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 CYP1B1Q16678 543 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 ODR4Q5SWX8 454 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 SLC13A5Q86YT5 568 aaPredicted RBP19.83■□□□□ 0.76
HPS3-204ENST00000462030 KAT5Q92993 513 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 CD101Q93033 1021 aa19.83■□□□□ 0.76
HPS3-204ENST00000462030 WRAP73Q9P2S5 460 aaPredicted RBP19.83■□□□□ 0.76
HPS3-204ENST00000462030 GGPS1O95749 300 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 PSEN1P49768 467 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 TCP10Q12799 353 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 DHX37Q8IY37 1157 aaKnown RBP19.82■□□□□ 0.76
HPS3-204ENST00000462030 RPS6KC1Q96S38 1066 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 TUFT1Q9NNX1 390 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.82■□□□□ 0.76
HPS3-204ENST00000462030 NYAP2Q9P242 653 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 USP15Q9Y4E8 981 aaPredicted RBP19.82■□□□□ 0.76
HPS3-204ENST00000462030 RBBP6Q7Z6E9 1792 aaKnown RBP19.82■□□□□ 0.76
HPS3-204ENST00000462030 TMEM120BA0PK00 339 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 TISP43B9A030 160 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 BCRP11274 1271 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 NQO1P15559 274 aaKnown RBP19.82■□□□□ 0.76
HPS3-204ENST00000462030 MMP14P50281 582 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 APOBEC3HQ6NTF7 200 aaKnown RBP19.82■□□□□ 0.76
HPS3-204ENST00000462030 FAM196AQ6ZSG2 479 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 AGAP11Q8TF27 550 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 ECT2Q9H8V3 914 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 EBF2Q9HAK2 575 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 ACP6Q9NPH0 428 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 AAASQ9NRG9 546 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 CTNNAL1Q9UBT7 734 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
HPS3-204ENST00000462030 UBE4BO95155 1302 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 PASKQ96RG2 1323 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 F5H6K3 240 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 TP73O15350 636 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 ALDH5A1P51649 535 aaPredicted RBP19.81■□□□□ 0.76
HPS3-204ENST00000462030 ZNF131P52739 623 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 ZNF568Q3ZCX4 644 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 CERKLQ49MI3 558 aaPredicted RBP19.81■□□□□ 0.76
HPS3-204ENST00000462030 LRCH2Q5VUJ6 765 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 VSTM1Q6UX27 236 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 CRELD2Q6UXH1 353 aaPredicted RBP19.81■□□□□ 0.76
HPS3-204ENST00000462030 ARHGEF2Q92974 986 aaKnown RBP19.81■□□□□ 0.76
HPS3-204ENST00000462030 TAOK3Q9H2K8 898 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 PCIF1Q9H4Z3 704 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 HOMER3Q9NSC5 361 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 BBOX1O75936 387 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 SGPL1O95470 568 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 ICA1Q05084 483 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 PPP3CAQ08209 521 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 ZNF268Q14587 947 aaPredicted RBP19.81■□□□□ 0.76
HPS3-204ENST00000462030 TCEAL1Q15170 157 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 CYFIP1Q7L576 1253 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 SYCP3Q8IZU3 236 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 NSMCE1Q8WV22 266 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 RUNDC3BQ96NL0 473 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 PCDHAC2Q9Y5I4 1007 aa19.81■□□□□ 0.76
HPS3-204ENST00000462030 RTN2O75298 545 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 CYP3A4P08684 503 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 DLATP10515 647 aaKnown RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 CHRNB2P17787 502 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 RFX1P22670 979 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 GALNTL6Q49A17 601 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 SYDE2Q5VT97 1194 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 KIF2BQ8N4N8 673 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 ANKRD42Q8N9B4 389 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 PRCCQ92733 491 aaPredicted RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 THOC1Q96FV9 657 aaKnown RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 SEL1LQ9UBV2 794 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 MTUS1Q9ULD2 1270 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 DDTLA6NHG4 134 aaPredicted RBP19.8■□□□□ 0.76
HPS3-204ENST00000462030 IGF2BP3O00425 579 aaKnown RBP eCLIP19.8■□□□□ 0.76
HPS3-204ENST00000462030 SPOPO43791 374 aa19.8■□□□□ 0.76
HPS3-204ENST00000462030 PSMD10O75832 226 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms