RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PRKCQQ04759 706 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 CSTF1Q05048 431 aaKnown RBP19.3■□□□□ 0.68
TOP3A-202ENST00000461127 PFKFB3Q16875 520 aaPredicted RBP19.3■□□□□ 0.68
TOP3A-202ENST00000461127 LRCH2Q5VUJ6 765 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 PALB2Q86YC2 1186 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 RDM1Q8NG50 284 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 OSBPL6Q9BZF3 934 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.3■□□□□ 0.68
TOP3A-202ENST00000461127 USP18Q9UMW8 372 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 SMG5Q9UPR3 1016 aaKnown RBP19.3■□□□□ 0.68
TOP3A-202ENST00000461127 MTCL1Q9Y4B5 1905 aaKnown RBP19.29■□□□□ 0.68
TOP3A-202ENST00000461127 FSHRP23945 695 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 GPC5P78333 572 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 DSG1Q02413 1049 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 SNW1Q13573 536 aaKnown RBP19.29■□□□□ 0.68
TOP3A-202ENST00000461127 UBXN2BQ14CS0 331 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 CREB3L3Q68CJ9 461 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 TAS1R1Q7RTX1 841 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 MIER3Q7Z3K6 550 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 CNNM3Q8NE01 707 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 LENG9Q96B70 501 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 MARCH5Q9NX47 278 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 ZSCAN32Q9NX65 697 aa19.29■□□□□ 0.68
TOP3A-202ENST00000461127 MSH4O15457 936 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 MAFO75444 373 aaPredicted RBP19.28■□□□□ 0.68
TOP3A-202ENST00000461127 AFF1P51825 1210 aaKnown RBP19.28■□□□□ 0.68
TOP3A-202ENST00000461127 PFKPQ01813 784 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 CREMQ03060 361 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 MLF2Q15773 248 aaPredicted RBP19.28■□□□□ 0.68
TOP3A-202ENST00000461127 MTSS1LQ765P7 747 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 DDX23Q9BUQ8 820 aaKnown RBP19.28■□□□□ 0.68
TOP3A-202ENST00000461127 EPC1Q9H2F5 836 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 UNC45AQ9H3U1 944 aa19.28■□□□□ 0.68
TOP3A-202ENST00000461127 MYH15Q9Y2K3 1946 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 DCDC2BA2VCK2 349 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 FAM170BA6NMN3 283 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 TGM5O43548 720 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 TBC1D4O60343 1298 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 ITGA4P13612 1032 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 SLC44A4Q53GD3 710 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 BMP2KLQ5H9B9 411 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 RSPO2Q6UXX9 243 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-202ENST00000461127 COLGALT2Q8IYK4 626 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 GPR65Q8IYL9 337 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 RNF168Q8IYW5 571 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-202ENST00000461127 ZBTB44Q8NCP5 570 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 ST13P5Q8NFI4 369 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-202ENST00000461127 SLC5A5Q92911 643 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 FGF14Q92915 247 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 CEP89Q96ST8 783 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 SH2D3AQ9BRG2 576 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 LSG1Q9H089 658 aaKnown RBP19.27■□□□□ 0.68
TOP3A-202ENST00000461127 IFT122Q9HBG6 1241 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 GMEB2Q9UKD1 530 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 CDH7Q9ULB5 785 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 BRPF3Q9ULD4 1205 aa19.27■□□□□ 0.68
TOP3A-202ENST00000461127 CHD8Q9HCK8 2581 aa19.27■□□□□ 0.67
TOP3A-202ENST00000461127 CCDC196A0A1B0GTZ2 297 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 TMEM150BA6NC51 233 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 NCAM2O15394 837 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 ZMYND10O75800 440 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 NCLP19338 710 aaKnown RBP19.26■□□□□ 0.67
TOP3A-202ENST00000461127 NECTIN1Q15223 517 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 USP41Q3LFD5 358 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 ZBTB41Q5SVQ8 909 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 RNF20Q5VTR2 975 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 PARM1Q6UWI2 310 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 SRGAP1Q7Z6B7 1085 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 RPP25Q9BUL9 199 aaKnown RBP19.26■□□□□ 0.67
TOP3A-202ENST00000461127 COLEC11Q9BWP8 271 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 CHST7Q9NS84 486 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 FNIP2Q9P278 1114 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-202ENST00000461127 COL4A3BPQ9Y5P4 624 aa19.26■□□□□ 0.67
TOP3A-202ENST00000461127 PATJQ8NI35 1801 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 KLF18A0A0U1RQI7 1052 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 ADRB1P08588 477 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 CDC27P30260 824 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 USP11P51784 963 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 RCAN1P53805 252 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 GLYCTKQ8IVS8 523 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 EXOC8Q8IYI6 725 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 SLC7A3Q8WY07 619 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 NELL2Q99435 816 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 LTB4R2Q9NPC1 389 aa19.25■□□□□ 0.67
TOP3A-202ENST00000461127 ARL5CA6NH57 179 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 LILRB5O75023 590 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 EFEMP2O95967 443 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 DSC1Q08554 894 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 LILRA6Q6PI73 481 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 GRASPQ7Z6J2 395 aaPredicted RBP19.24■□□□□ 0.67
TOP3A-202ENST00000461127 FAM126AQ9BYI3 521 aaPredicted RBP19.24■□□□□ 0.67
TOP3A-202ENST00000461127 FAM217BQ9NTX9 383 aaPredicted RBP19.24■□□□□ 0.67
TOP3A-202ENST00000461127 RAB23Q9ULC3 237 aa19.24■□□□□ 0.67
TOP3A-202ENST00000461127 PSMD10O75832 226 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms