RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 A0A1B0GVL5 298 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 FRMD3A2A2Y4 597 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 K7ERI5 159 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 N4BP3O15049 544 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 ZNF623O75123 536 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 UPP2O95045 317 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 EOMESO95936 686 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 MAPTP10636 758 aaKnown RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 ARF4P18085 180 aaPredicted RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 PBX2P40425 430 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 SYKP43405 635 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 TMEM161BQ8NDZ6 487 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 DNAJC19Q96DA6 116 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 RC3H2Q9HBD1 1191 aaKnown RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 FAM105AQ9NUU6 356 aa12.18□□□□□ -0.46
APTX-209ENST00000460940 YBX2Q9Y2T7 364 aaKnown RBP12.18□□□□□ -0.46
APTX-209ENST00000460940 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 SLC16A4O15374 487 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 B4GALT5O43286 388 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
APTX-209ENST00000460940 DGKIO75912 1065 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 MYL1P05976 194 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 CA3P07451 260 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 NDUFA8P51970 172 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 STRN3Q13033 797 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
APTX-209ENST00000460940 FAM178BQ8IXR5 827 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 CMTR2Q8IYT2 770 aaKnown RBP12.17□□□□□ -0.46
APTX-209ENST00000460940 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 PGBD4Q96DM1 585 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 CCDC34Q96HJ3 373 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 MRPL4Q9BYD3 311 aaKnown RBP12.17□□□□□ -0.46
APTX-209ENST00000460940 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 SPTLC3Q9NUV7 552 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
APTX-209ENST00000460940 K7ENM7 598 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 UBXN11Q5T124 520 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 PPP2R2DQ66LE6 453 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 CCDC65Q8IXS2 484 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ANKRD7Q92527 254 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ZNF689Q96CS4 500 aaPredicted RBP12.17□□□□□ -0.46
APTX-209ENST00000460940 CPB2Q96IY4 423 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 NKX2-4Q9H2Z4 354 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 OLFML3Q9NRN5 406 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
APTX-209ENST00000460940 ZMYM2Q9UBW7 1377 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 MYH11P35749 1972 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
APTX-209ENST00000460940 LIG1P18858 919 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 ALCAMQ13740 583 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 DCAF4L1Q3SXM0 396 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
APTX-209ENST00000460940 SFR1Q86XK3 245 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 HVCN1Q96D96 273 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 FIZ1Q96SL8 496 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
APTX-209ENST00000460940 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 GOLPH3LQ9H4A5 285 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 PANK4Q9NVE7 773 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 SERTAD1Q9UHV2 236 aa12.16□□□□□ -0.46
APTX-209ENST00000460940 GBF1Q92538 1859 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 MBD3O95983 291 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 IDEP14735 1019 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 MYOGP15173 224 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 ASIC1P78348 528 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 ABI1Q8IZP0 508 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
APTX-209ENST00000460940 SAMD11Q96NU1 681 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 RWDD3Q9Y3V2 267 aa12.15□□□□□ -0.46
APTX-209ENST00000460940 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 EDN1P05305 212 aa12.14□□□□□ -0.47
APTX-209ENST00000460940 IBSPP21815 317 aaPredicted RBP12.14□□□□□ -0.47
APTX-209ENST00000460940 GTF2BQ00403 316 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms