RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 A0A1B0GUA9 196 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 ARF4P18085 180 aaPredicted RBP24.69■■□□□ 1.54
C9orf3-209ENST00000460573 GTF2BQ00403 316 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 ALCAMQ13740 583 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 ZNF720Q7Z2F6 126 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 GRAMD1CQ8IYS0 662 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 ARNTL2Q8WYA1 636 aa24.69■■□□□ 1.54
C9orf3-209ENST00000460573 MRPL4Q9BYD3 311 aaKnown RBP24.69■■□□□ 1.54
C9orf3-209ENST00000460573 MRPL44Q9H9J2 332 aaKnown RBP24.69■■□□□ 1.54
C9orf3-209ENST00000460573 N4BP3O15049 544 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 KINO60870 393 aaKnown RBP24.68■■□□□ 1.54
C9orf3-209ENST00000460573 NR1I2O75469 434 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 LIG1P18858 919 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 COASYQ13057 564 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 SKIV2LQ15477 1246 aaKnown RBP24.68■■□□□ 1.54
C9orf3-209ENST00000460573 FAM117BQ6P1L5 589 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 TAS1R3Q7RTX0 852 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 NPAS4Q8IUM7 802 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 HVCN1Q96D96 273 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 COL25A1Q9BXS0 654 aaPredicted RBP24.68■■□□□ 1.54
C9orf3-209ENST00000460573 PCDHB7Q9Y5E2 793 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 PCDHB13Q9Y5F0 798 aa24.68■■□□□ 1.54
C9orf3-209ENST00000460573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-209ENST00000460573 B4GALT5O43286 388 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 ZNF623O75123 536 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 GJB5O95377 273 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 EOMESO95936 686 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 NMT1P30419 496 aaKnown RBP24.67■■□□□ 1.54
C9orf3-209ENST00000460573 ADGRE1Q14246 886 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 TMEM132AQ24JP5 1023 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 SLC27A1Q6PCB7 646 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 STXBP4Q6ZWJ1 553 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 APBB1IPQ7Z5R6 666 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-209ENST00000460573 CCDC47Q96A33 483 aaKnown RBP24.67■■□□□ 1.54
C9orf3-209ENST00000460573 CPB2Q96IY4 423 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 ADPGKQ9BRR6 497 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 FAM105AQ9NUU6 356 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 TMEM161AQ9NX61 479 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 LRFN2Q9ULH4 789 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 TBX20Q9UMR3 447 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 CDH23Q9H251 3354 aa24.67■■□□□ 1.54
C9orf3-209ENST00000460573 CASP1P29466 404 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 EHHADHQ08426 723 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 ATF7IP2Q5U623 682 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 ECHDC2Q86YB7 292 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 CRIPAKQ8N1N5 446 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 ACO2Q99798 780 aaKnown RBP24.66■■□□□ 1.54
C9orf3-209ENST00000460573 STRA6Q9BX79 667 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 LMBRD1Q9NUN5 540 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 THEGQ9P2T0 379 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 TNFSF13BQ9Y275 285 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 PTPRSQ13332 1948 aa24.66■■□□□ 1.54
C9orf3-209ENST00000460573 RBAK-RBAKDNI3L0D1 243 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 DPYDQ12882 1025 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 PSMD2Q13200 908 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 POSTNQ15063 836 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 FAM26FQ5R3K3 315 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 UBXN11Q5T124 520 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 NT5DC1Q5TFE4 455 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 ZPBP2Q6X784 338 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 TMCO2Q7Z6W1 182 aaPredicted RBP24.65■■□□□ 1.54
C9orf3-209ENST00000460573 PGBD4Q96DM1 585 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 RAD9AQ99638 391 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 TBC1D7Q9P0N9 293 aa24.65■■□□□ 1.54
C9orf3-209ENST00000460573 TTC3P53804 2025 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 HOXA2O43364 376 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 KLRC4O43908 158 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 PPP1R37O75864 691 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 UPP2O95045 317 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 GCNT3O95395 438 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 RPN1P04843 607 aaKnown RBP24.64■■□□□ 1.54
C9orf3-209ENST00000460573 TAP1Q03518 808 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 MRPL10Q7Z7H8 261 aaKnown RBP24.64■■□□□ 1.54
C9orf3-209ENST00000460573 MAP4K3Q8IVH8 894 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 RSPH1Q8WYR4 309 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 TRIM6Q9C030 488 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-209ENST00000460573 PDZD7Q9H5P4 517 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 EXOC1Q9NV70 894 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 EXOC7Q9UPT5 735 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 INSL6Q9Y581 213 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 PCDHB2Q9Y5E7 798 aa24.64■■□□□ 1.54
C9orf3-209ENST00000460573 RFXAPO00287 272 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 PIGRP01833 764 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 EDN1P05305 212 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 HTRA4P83105 476 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-209ENST00000460573 DCAF4L1Q3SXM0 396 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 ZC2HC1CQ53FD0 456 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-209ENST00000460573 ZNF598Q86UK7 904 aaKnown RBP24.63■■□□□ 1.53
C9orf3-209ENST00000460573 HACE1Q8IYU2 909 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 ACCSQ96QU6 501 aa24.63■■□□□ 1.53
C9orf3-209ENST00000460573 TTLL13PA6NNM8 815 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 TOM1L1O75674 476 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 PRR29P0C7W0 189 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 KCNB1Q14721 858 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 KMT5BQ4FZB7 885 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 TJAP1Q5JTD0 557 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 L1TD1Q5T7N2 865 aaKnown RBP24.62■■□□□ 1.53
C9orf3-209ENST00000460573 BICD1Q96G01 975 aa24.62■■□□□ 1.53
C9orf3-209ENST00000460573 TARS2Q9BW92 718 aaKnown RBP24.62■■□□□ 1.53
C9orf3-209ENST00000460573 PTPRHQ9HD43 1115 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms