RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 DSC2Q02487 901 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 GJC2Q5T442 439 aaPredicted RBP6.96□□□□□ -1.3
CCDC50-203ENST00000460064 Q6ZVL8 140 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 CHST15Q7LFX5 561 aaPredicted RBP6.96□□□□□ -1.3
CCDC50-203ENST00000460064 OVCH2Q7RTZ1 564 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 SRGAP1Q7Z6B7 1085 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 CLEC14AQ86T13 490 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 TTC7BQ86TV6 843 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 REXO1L1PQ8IX06 675 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 MSL3Q8N5Y2 521 aaKnown RBP6.96□□□□□ -1.3
CCDC50-203ENST00000460064 PJA1Q8NG27 643 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 CGRRF1Q99675 332 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 KIAA1683Q9H0B3 1180 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 TLR9Q9NR96 1032 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 ING3Q9NXR8 418 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 PCDHB1Q9Y5F3 818 aa6.96□□□□□ -1.3
CCDC50-203ENST00000460064 A0A1B0GTL3 188 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 A6NNZ2 444 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 FFAR3O14843 346 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 TUSC2O75896 110 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF888P0CJ79 500 aaPredicted RBP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 KIR2DL3P43628 341 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 RHBDL3P58872 404 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 BIRC2Q13490 618 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 USP10Q14694 798 aaKnown RBP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 SAFBQ15424 915 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CCDC149Q6ZUS6 474 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 GPR155Q7Z3F1 870 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CARFQ8N187 725 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 KLHL36Q8N4N3 616 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CCHCR1Q8TD31 782 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 LPPQ93052 612 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CLPTM1LQ96KA5 538 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 UHRF1Q96T88 793 aaPredicted RBP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 C14orf93Q9H972 538 aaKnown RBP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CHST12Q9NRB3 414 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 TDP1Q9NUW8 608 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 PTPN22Q9Y2R2 807 aa6.95□□□□□ -1.3
CCDC50-203ENST00000460064 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
CCDC50-203ENST00000460064 TPP1O14773 563 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 B3GALT2O43825 422 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 FTLP02792 175 aaPredicted RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 CSF2RBP32927 897 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 AFF3P51826 1226 aaKnown RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 GALEQ14376 348 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 ACAP1Q15027 740 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 ZMAT1Q5H9K5 638 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 THEMIS2Q5TEJ8 643 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 USP30Q70CQ3 517 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 RSPH3Q86UC2 560 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 FAM156AQ8NDB6 213 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 ADAMTS17Q8TE56 1095 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 DACT3Q96B18 629 aaPredicted RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 OR10A2Q9H208 303 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 MANSC1Q9H8J5 431 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.94□□□□□ -1.3
CCDC50-203ENST00000460064 USP25Q9UHP3 1055 aa6.94□□□□□ -1.3
CCDC50-203ENST00000460064 APAF1O14727 1248 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 ZBED1O96006 694 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 PHKG2P15735 406 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 SYN1P17600 705 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 RHCEP18577 417 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 HTR1BP28222 390 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 SLC6A9P48067 706 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 MAP2K6P52564 334 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 CDC42EP1Q00587 391 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 RHDQ02161 417 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 OS9Q13438 667 aaPredicted RBP6.93□□□□□ -1.3
CCDC50-203ENST00000460064 PICALMQ13492 652 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF827Q17R98 1081 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 VMACQ2NL98 169 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 MST1LQ2TV78 715 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 AGBL4Q5VU57 503 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 KRT40Q6A162 431 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 IL31Q6EBC2 164 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 CYB5RLQ6IPT4 315 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 NPNTQ6UXI9 565 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 PQLC1Q8N2U9 271 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF480Q8WV37 535 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 HOXB13Q92826 284 aaPredicted RBP6.93□□□□□ -1.3
CCDC50-203ENST00000460064 PMM1Q92871 262 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 RAB24Q969Q5 203 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 RGMAQ96B86 450 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 SLC7A6OSQ96CW6 309 aaPredicted RBP6.93□□□□□ -1.3
CCDC50-203ENST00000460064 TMEM60Q9H2L4 133 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 BCO1Q9HAY6 547 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 SIK3Q9Y2K2 1263 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
CCDC50-203ENST00000460064 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 FAM227AF5H4B4 570 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 SLC16A6O15403 523 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 SGTAO43765 313 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 TOX4O94842 621 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 WNT3AP56704 352 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms