RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TRIM49CP0CI26 452 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 PRKAR2AP13861 404 aaKnown RBP26.6■■□□□ 1.85
U2AF1-204ENST00000459639 ELNP15502 786 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 TSR1Q2NL82 804 aaKnown RBP26.6■■□□□ 1.85
U2AF1-204ENST00000459639 NFRKBQ6P4R8 1299 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 MFSD14AQ96MC6 490 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 FZD8Q9H461 694 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 KCND1Q9NSA2 647 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 SPTLC3Q9NUV7 552 aa26.6■■□□□ 1.85
U2AF1-204ENST00000459639 SCN10AQ9Y5Y9 1956 aa26.59■■□□□ 1.85
U2AF1-204ENST00000459639 MBLAC1A4D2B0 266 aaPredicted RBP26.59■■□□□ 1.85
U2AF1-204ENST00000459639 MBTD1Q05BQ5 628 aa26.59■■□□□ 1.85
U2AF1-204ENST00000459639 USP37Q86T82 979 aa26.59■■□□□ 1.85
U2AF1-204ENST00000459639 C17orf53Q8N3J3 647 aaPredicted RBP26.59■■□□□ 1.85
U2AF1-204ENST00000459639 TMC2Q8TDI7 906 aa26.59■■□□□ 1.85
U2AF1-204ENST00000459639 AGO2Q9UKV8 859 aaKnown RBP26.59■■□□□ 1.85
U2AF1-204ENST00000459639 A0A0B4J269 797 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 MYADML2A6NDP7 307 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 ACKR2O00590 384 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 FKTNO75072 461 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 NOL4O94818 638 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 LDHAP00338 332 aaKnown RBP26.58■■□□□ 1.85
U2AF1-204ENST00000459639 NOLC1Q14978 699 aaKnown RBP eCLIP26.58■■□□□ 1.85
U2AF1-204ENST00000459639 ARHGEF6Q15052 776 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 TMTC1Q8IUR5 882 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 IFT122Q9HBG6 1241 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 GCNT4Q9P109 453 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 USP20Q9Y2K6 914 aa26.58■■□□□ 1.85
U2AF1-204ENST00000459639 INO80B-WBP1J3KQ70 363 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 P4HA2O15460 535 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 TOM1L1O75674 476 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 PON1P27169 355 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 DLG4P78352 724 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 MYL7Q01449 175 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CYP24A1Q07973 514 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 FAM187BQ17R55 369 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 MAP3K21Q5TCX8 1036 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ZNF410Q86VK4 478 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 KIAA0319LQ8IZA0 1049 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 PLEKHO2Q8TD55 490 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 PXYLP1Q8TE99 480 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ACO2Q99798 780 aaKnown RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 FAM213AQ9BRX8 229 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 MSTO1Q9BUK6 570 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 INO80BQ9C086 356 aaPredicted RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 HAPLN2Q9GZV7 340 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 GANQ9H2C0 597 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 PRMT7Q9NVM4 692 aaPredicted RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ANKFY1Q9P2R3 1169 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 SMIM35A0A1B0GVV1 85 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ZNF233A6NK53 670 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ZEB2O60315 1214 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 VTNP04004 478 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CCND3P30281 292 aaPredicted RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CHMP4BP1P59074 171 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ADAM17P78536 824 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 MEA1Q16626 185 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CBWD6Q4V339 395 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CBWD3Q5JTY5 395 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 GNASQ5JWF2 1037 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CBWD5Q5RIA9 395 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 C1orf220Q5T0J3 134 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 DPY19L2P1Q6NXN4 242 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CYP26C1Q6V0L0 522 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 CACNA2D4Q7Z3S7 1137 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 RAET1EQ8TD07 263 aa26.57■■□□□ 1.84
U2AF1-204ENST00000459639 ZBTB45Q96K62 511 aaPredicted RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 MTG1Q9BT17 334 aaPredicted RBP26.57■■□□□ 1.84
U2AF1-204ENST00000459639 A0A087WZ62 844 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 PMM2O15305 246 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 SLC9A1P19634 815 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 HNRNPH3P31942 346 aaKnown RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 GPC3P51654 580 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 CDC42EP1Q00587 391 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 PARD3BQ8TEW8 1205 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 BAP1Q92560 729 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 ZNF668Q96K58 619 aaPredicted RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 FDXACB1Q9BRP7 624 aaPredicted RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 NUCKS1Q9H1E3 243 aaKnown RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 ZNHIT6Q9NWK9 470 aaKnown RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 FBXL5Q9UKA1 691 aa26.56■■□□□ 1.84
U2AF1-204ENST00000459639 TRIP12Q14669 1992 aaPredicted RBP26.56■■□□□ 1.84
U2AF1-204ENST00000459639 CLDN3O15551 220 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 ADAMTS4O75173 837 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 HOXC8P31273 242 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 CLCN1P35523 988 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 MATR3P43243 847 aaKnown RBP eCLIP26.55■■□□□ 1.84
U2AF1-204ENST00000459639 PRMT2P55345 433 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 PRPF4BQ13523 1007 aaKnown RBP26.55■■□□□ 1.84
U2AF1-204ENST00000459639 E4F1Q66K89 784 aaPredicted RBP26.55■■□□□ 1.84
U2AF1-204ENST00000459639 TSHZ1Q6ZSZ6 1077 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 MINDY3Q9H8M7 445 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 XPNPEP3Q9NQH7 507 aa26.55■■□□□ 1.84
U2AF1-204ENST00000459639 TTLL13PA6NNM8 815 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PGK1P00558 417 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PPP3CAQ08209 521 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 CETN1Q12798 172 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 KLHDC7AQ5VTJ3 777 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 PDXDC1Q6P996 788 aa26.54■■□□□ 1.84
U2AF1-204ENST00000459639 CCAR2Q8N163 923 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms