RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
SNX27-204ENST00000458013 XXYLT1Q8NBI6 393 aa20.86■□□□□ 0.93
SNX27-204ENST00000458013 LXNQ9BS40 222 aa20.86■□□□□ 0.93
SNX27-204ENST00000458013 STX18Q9P2W9 335 aaKnown RBP20.86■□□□□ 0.93
SNX27-204ENST00000458013 MMP10P09238 476 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 IZUMO3Q5VZ72 239 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 SNX5Q9Y5X3 404 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 MMP19Q99542 508 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 SETD1BQ9UPS6 1966 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 MEFVO15553 781 aaPredicted RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 LDHAP00338 332 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 RGS7P49802 495 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 OCA2Q04671 838 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 TMEM62Q0P6H9 643 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 TMEM179Q6ZVK1 233 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 KCTD17Q8N5Z5 321 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 SNF8Q96H20 258 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 LRRC37BQ96QE4 947 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 SH3GLB2Q9NR46 395 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 DBR1Q9UK59 544 aaKnown RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 EMSYQ7Z589 1322 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 GMNCA6NCL1 334 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 KCNA2P16389 499 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 PPARGP37231 505 aaPredicted RBP20.85■□□□□ 0.93
SNX27-204ENST00000458013 SULT1E1P49888 294 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 TEKT4Q8WW24 435 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 BRIP1Q9BX63 1249 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 MID2Q9UJV3 735 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 MYO1CO00159 1063 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 AARSP49588 968 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNX27-204ENST00000458013 RINLQ6ZS11 566 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 RMDN1Q96DB5 314 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 SLC9A2Q9UBY0 812 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 AMACRQ9UHK6 382 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 TSPOAP1O95153 1857 aa20.85■□□□□ 0.93
SNX27-204ENST00000458013 A8MXQ7 604 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 LMNAP02545 664 aaKnown RBP20.84■□□□□ 0.93
SNX27-204ENST00000458013 BZW1Q7L1Q6 419 aaKnown RBP20.84■□□□□ 0.93
SNX27-204ENST00000458013 MARCOQ9UEW3 520 aaPredicted RBP20.84■□□□□ 0.93
SNX27-204ENST00000458013 VCAM1P19320 739 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 LONRF1Q17RB8 773 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 TADA2BQ86TJ2 420 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 KIF12Q96FN5 646 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 ASIC4Q96FT7 647 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 TRIM51Q9BSJ1 452 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 ADNPQ9H2P0 1102 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 RXRBP28702 533 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 SLC10A5Q5PT55 438 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 TMEM35BQ8NCS4 154 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 BEST2Q8NFU1 509 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 EIF2AK1Q9BQI3 630 aaKnown RBP20.84■□□□□ 0.93
SNX27-204ENST00000458013 KCNN4O15554 427 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 NMT1P30419 496 aaKnown RBP20.84■□□□□ 0.93
SNX27-204ENST00000458013 PARP9Q8IXQ6 854 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 TMEM94Q12767 1356 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 DPYSL4O14531 572 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 KLHL38Q2WGJ6 581 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 IL31Q6EBC2 164 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 EMBQ6PCB8 327 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 OTUD5Q96G74 571 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 ETNK1Q9HBU6 452 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 V9GYQ6 96 aa20.84■□□□□ 0.93
SNX27-204ENST00000458013 KRT38O76015 456 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 RANBP1P43487 201 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 PHKA2P46019 1235 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 SESN2P58004 480 aaPredicted RBP20.83■□□□□ 0.93
SNX27-204ENST00000458013 AP2B1P63010 937 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 ICA1LQ8NDH6 482 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 SDC4P31431 198 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 GRIK1P39086 918 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 TERF2Q15554 542 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 RC3H1Q5TC82 1133 aaKnown RBP20.83■□□□□ 0.93
SNX27-204ENST00000458013 PGBD4Q96DM1 585 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 TMA16Q96EY4 203 aaKnown RBP20.83■□□□□ 0.93
SNX27-204ENST00000458013 TCN1P20061 433 aaPredicted RBP20.83■□□□□ 0.93
SNX27-204ENST00000458013 LRRC31Q6UY01 552 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 SLC7A5P2Q9GIP4 190 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 IP6K2Q9UHH9 426 aa20.83■□□□□ 0.93
SNX27-204ENST00000458013 TCP11X1B4DZS4 312 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 CDH6P55285 790 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 GPSM2P81274 684 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 ARL6IP4Q66PJ3 421 aaKnown RBP20.83■□□□□ 0.92
SNX27-204ENST00000458013 TTC26A0AVF1 554 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 CPB1P15086 417 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 SMARCA1P28370 1054 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 COPB2P35606 906 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 PRAMEP78395 509 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 NDUFAF2Q8N183 169 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 DPF2Q92785 391 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 NPHS2Q9NP85 383 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 CHORDC1Q9UHD1 332 aaPredicted RBP20.83■□□□□ 0.92
SNX27-204ENST00000458013 TRIM33Q9UPN9 1127 aa20.83■□□□□ 0.92
SNX27-204ENST00000458013 PTK2BQ14289 1009 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 KIZQ2M2Z5 673 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 DDX53Q86TM3 631 aaKnown RBP20.82■□□□□ 0.92
SNX27-204ENST00000458013 CLCA2Q9UQC9 943 aa20.82■□□□□ 0.92
SNX27-204ENST00000458013 PPP1R2P3Q6NXS1 205 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms