RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PAK2Q13177 524 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 KRT39Q6A163 491 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 SLC39A4Q6P5W5 647 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 CCDC125Q86Z20 511 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 CCDC60Q8IWA6 550 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 RHOT2Q8IXI1 618 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 SLC20A1Q8WUM9 679 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 KAT5Q92993 513 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 MFSD14AQ96MC6 490 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ISCUQ9H1K1 167 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 TMEM8AQ9HCN3 771 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 XPNPEP1Q9NQW7 623 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 TTC7AQ9ULT0 858 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 DIS3Q9Y2L1 958 aaKnown RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 NOC2LQ9Y3T9 749 aaKnown RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 A0A0G2JMZ2 1700 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ERICH4A6NGS2 130 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 PHACTR2O75167 634 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ABCD1P33897 745 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 HIRAP54198 1017 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ACTR2P61160 394 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 PRKCEQ02156 737 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 GUCY2DQ02846 1103 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 PRKG1Q13976 671 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 FAM71AQ8IYT1 594 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 KCNN1Q92952 543 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ARHGEF26Q96DR7 871 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 CCDC66A2RUB6 948 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 BHMG1C9JSJ3 638 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-202ENST00000457422 RAD51CO43502 376 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 GTF2H1P32780 548 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
CCDC43-202ENST00000457422 ALS2CLQ60I27 953 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC43-202ENST00000457422 PLEKHA4Q9H4M7 779 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 ATP6V0A4Q9HBG4 840 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.02■□□□□ 0.482e-12■■■■■ 298.1
CCDC43-202ENST00000457422 CYP26B1Q9NR63 512 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 ADGRA3Q8IWK6 1321 aa18.02■□□□□ 0.48
CCDC43-202ENST00000457422 ZSCAN5CA6NGD5 496 aaPredicted RBP18.02■□□□□ 0.47
CCDC43-202ENST00000457422 H0YCG3 227 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.47
CCDC43-202ENST00000457422 GARTP22102 1010 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 ICAM3P32942 547 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 CARSP49589 748 aaKnown RBP18.02■□□□□ 0.47
CCDC43-202ENST00000457422 GPC3P51654 580 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 SUPT20HL1Q3ZLR7 823 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 BRDTQ58F21 947 aaPredicted RBP18.02■□□□□ 0.47
CCDC43-202ENST00000457422 MIS18BP1Q6P0N0 1132 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 USP37Q86T82 979 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 MREGQ8N565 214 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 CHST13Q8NET6 341 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 DNERQ8NFT8 737 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 SHC3Q92529 594 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 CCDC127Q96BQ5 260 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 ARHGAP28Q9P2N2 729 aa18.02■□□□□ 0.47
CCDC43-202ENST00000457422 PAPPA2Q9BXP8 1791 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 DDX3YO15523 660 aaKnown RBP18.01■□□□□ 0.47
CCDC43-202ENST00000457422 SUPT20HL2P0C7V6 817 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 MFAP3P55082 362 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 XKR3Q5GH77 459 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 KLHL7Q8IXQ5 586 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 EPS8L1Q8TE68 723 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 CASKIN2Q8WXE0 1202 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 SEMA4DQ92854 862 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 KREMEN1Q96MU8 473 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 SH3GL2Q99962 352 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 KCNG1Q9UIX4 513 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 NOCTQ9UK39 431 aaKnown RBP18.01■□□□□ 0.47
CCDC43-202ENST00000457422 POLR2AP24928 1970 aaKnown RBP18.01■□□□□ 0.47
CCDC43-202ENST00000457422 SIP14410 1827 aa18.01■□□□□ 0.47
CCDC43-202ENST00000457422 ESYT3A0FGR9 886 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 GZMAP12544 262 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 LMAN1P49257 510 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 CYP24A1Q07973 514 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 RPUSD2Q8IZ73 545 aaKnown RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 GPC2Q8N158 579 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 TSEN2Q8NCE0 465 aaKnown RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 WHAMMQ8TF30 809 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 RIN2Q8WYP3 895 aaPredicted RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 CARD9Q9H257 536 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
CCDC43-202ENST00000457422 NFU1Q9UMS0 254 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 RTN2O75298 545 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 ATG7O95352 703 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 USP8P40818 1118 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 STXBP2Q15833 593 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 C11orf63Q6NUN7 778 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 GPD1LQ8N335 351 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 FBXL13Q8NEE6 735 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 HELQQ8TDG4 1101 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 AFAP1L1Q8TED9 768 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 POMGNT1Q8WZA1 660 aa18■□□□□ 0.47
CCDC43-202ENST00000457422 IFT74Q96LB3 600 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms