RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OCRLQ01968 901 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 AGBL2Q5U5Z8 902 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA31A6Q5VVP1 1343 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DPY19L2Q6NUT2 758 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DNAJC10Q8IXB1 793 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC30A5Q8TAD4 765 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 RUFY1Q96T51 708 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 KLF6Q99612 283 aaPredicted RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 CYP39A1Q9NYL5 469 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ARID1BQ8NFD5 2236 aaPredicted RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ATRNO75882 1429 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 PSMA7O14818 248 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 BANF1O75531 89 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 CYP3A4P08684 503 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SNRPA1P09661 255 aaKnown RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 GYG1P46976 350 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 PFKPQ01813 784 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 MAPK7Q13164 816 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 RCN1Q15293 331 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SFMBT2Q5VUG0 894 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 OTOAQ7RTW8 1153 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ANKRD23Q86SG2 305 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DAAM2Q86T65 1068 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 NBPF5PQ86XG9 351 aaPredicted RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATS2Q86XZ4 545 aaKnown RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 AGGF1Q8N302 714 aaeCLIP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 RFWD2Q8NHY2 731 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 PLEKHO2Q8TD55 490 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 PPP4R1Q8TF05 950 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC35C1Q96A29 364 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 TMIGD2Q96BF3 282 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 NOX5Q96PH1 765 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 LRMDAQ9H2I8 198 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 RXFP1Q9HBX9 757 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 XPNPEP1Q9NQW7 623 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 MYO10Q9HD67 2058 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DDX58O95786 925 aaKnown RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ZSCAN5DPP0CG00 497 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ARID4AP29374 1257 aaPredicted RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 PDE6CP51160 858 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 GALK1P51570 392 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 LIN52Q52LA3 116 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 KANK3Q6NY19 840 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ELMSAN1Q6PJG2 1045 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 MFSD6Q6ZSS7 791 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SATL1Q86VE3 508 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ZFP28Q8NHY6 868 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 MTA3Q9BTC8 594 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 NAALADL1Q9UQQ1 740 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ALG6Q9Y672 507 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ITGA2BP08514 1039 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SMIM18P0DKX4 95 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 BRAFP15056 766 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 UBA7P41226 1012 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 YARSP54577 528 aaKnown RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ASIC1P78348 528 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 KCNH2Q12809 1159 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 CDC16Q13042 620 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 LBRQ14739 615 aaKnown RBP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 MAPK6Q16659 721 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 SFT2D3Q587I9 215 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 ANKLE2Q86XL3 938 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 DNAJC9Q8WXX5 260 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 TANKQ92844 425 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 EBF3Q9H4W6 596 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 UBR1Q8IWV7 1749 aa4.88□□□□□ -1.63
DEPDC1-202ENST00000456315 STXBP3O00186 592 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SCG2P13521 617 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TCF4P15884 667 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CUL3Q13618 768 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TRIM14Q14142 442 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RPS6KA1Q15418 735 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CBWD6Q4V339 395 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PPP6R3Q5H9R7 873 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CBWD3Q5JTY5 395 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CBWD5Q5RIA9 395 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 LMOD2Q6P5Q4 547 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 C4orf33Q8N1A6 199 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CYP2W1Q8TAV3 490 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MOCOSQ96EN8 888 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC113Q9H0I3 377 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 ASCC2Q9H1I8 757 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 DDX18Q9NVP1 670 aaKnown RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC7A8Q9UHI5 535 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PCDHA6Q9UN73 950 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PTPN22Q9Y2R2 807 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RGPD3A6NKT7 1758 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 RGPD4Q7Z3J3 1758 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 TRAFD1O14545 582 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 GSC2O15499 205 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PPP1R11O60927 126 aaPredicted RBP4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 SPAG7O75391 227 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 PON1P27169 355 aa4.87□□□□□ -1.63
DEPDC1-202ENST00000456315 MSX2P35548 267 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms