RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 EPSTI1Q96J88 318 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 IPPQ9Y573 584 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 PHLPP2Q6ZVD8 1323 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 MYH11P35749 1972 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 ZMYM2Q9UBW7 1377 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 INPPL1O15357 1258 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 PPP6R2O75170 966 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 OFD1O75665 1012 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 SSBP05455 408 aaKnown RBP eCLIP19.12■□□□□ 0.65
USP39-208ENST00000455732 PBX3P40426 434 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 PEX3P56589 373 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 STK38Q15208 465 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 LONRF3Q496Y0 759 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 ATL3Q6DD88 541 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 USP49Q70CQ1 688 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 SPRYD3Q8NCJ5 442 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 SMG8Q8ND04 991 aaKnown RBP19.12■□□□□ 0.65
USP39-208ENST00000455732 RASSF8Q8NHQ8 419 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 ZNF558Q96NG5 402 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 CLIC6Q96NY7 704 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 KIFC3Q9BVG8 833 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 EIF2AQ9BY44 585 aaKnown RBP19.12■□□□□ 0.65
USP39-208ENST00000455732 POLD4Q9HCU8 107 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 UBN1Q9NPG3 1134 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 TLR9Q9NR96 1032 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 CLDND1Q9NY35 253 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 ARHGAP28Q9P2N2 729 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 KCNG1Q9UIX4 513 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 LZTS1Q9Y250 596 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 PCDHGC5Q9Y5F6 944 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 C5orf42Q9H799 3197 aa19.12■□□□□ 0.65
USP39-208ENST00000455732 CARNS1A5YM72 827 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 N4BP3O15049 544 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 PPM1AP35813 382 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 TXLNAP40222 546 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 ERVFC1P60507 584 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 PRPF4BQ13523 1007 aaKnown RBP19.11■□□□□ 0.65
USP39-208ENST00000455732 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 NOMO2Q5JPE7 1267 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 SPECC1Q5M775 1068 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 HACE1Q8IYU2 909 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 SPIRE2Q8WWL2 714 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 MRPS27Q92552 414 aaKnown RBP19.11■□□□□ 0.65
USP39-208ENST00000455732 LARP4BQ92615 738 aaKnown RBP19.11■□□□□ 0.65
USP39-208ENST00000455732 NTPCRQ9BSD7 190 aaKnown RBP19.11■□□□□ 0.65
USP39-208ENST00000455732 PDZD7Q9H5P4 517 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 TMEM134Q9H6X4 195 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 RSAD1Q9HA92 442 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 TBC1D13Q9NVG8 400 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 STK17AQ9UEE5 414 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 CCDC39Q9UFE4 941 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 ODF2LQ9ULJ1 636 aa19.11■□□□□ 0.65
USP39-208ENST00000455732 RBM19Q9Y4C8 960 aaKnown RBP19.11■□□□□ 0.65
USP39-208ENST00000455732 H3BQ06 376 aaPredicted RBP19.1■□□□□ 0.65
USP39-208ENST00000455732 FSCN2O14926 492 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 SPTLC2O15270 562 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 PLS3P13797 630 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 COL9A1P20849 921 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 DLX2Q07687 328 aaPredicted RBP19.1■□□□□ 0.65
USP39-208ENST00000455732 ADAM15Q13444 863 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
USP39-208ENST00000455732 GPBP1Q86WP2 473 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 SLC39A11Q8N1S5 342 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
USP39-208ENST00000455732 KCNN1Q92952 543 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 PPP2R3CQ969Q6 453 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 TRIM6Q9C030 488 aaPredicted RBP19.1■□□□□ 0.65
USP39-208ENST00000455732 KMT5AQ9NQR1 393 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 SPG21Q9NZD8 308 aa19.1■□□□□ 0.65
USP39-208ENST00000455732 TTLL13PA6NNM8 815 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 CCDC169A6NNP5 214 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 LINC01565O15544 149 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 BRD1O95696 1058 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 EDN1P05305 212 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 ITGA4P13612 1032 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 DDIT3P35638 169 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 AFF1P51825 1210 aaKnown RBP19.09■□□□□ 0.65
USP39-208ENST00000455732 ZNF131P52739 623 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 BCAR1P56945 870 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 BECN1Q14457 450 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 MCM6Q14566 821 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 PDE12Q6L8Q7 609 aaKnown RBP19.09■□□□□ 0.65
USP39-208ENST00000455732 URGCPQ8TCY9 931 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 KCNG4Q8TDN1 519 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 NXF3Q9H4D5 531 aaKnown RBP19.09■□□□□ 0.65
USP39-208ENST00000455732 IGFLR1Q9H665 355 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 NRDE2Q9H7Z3 1164 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 KANSL3Q9P2N6 904 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 GIT1Q9Y2X7 761 aa19.09■□□□□ 0.65
USP39-208ENST00000455732 TRIP11Q15643 1979 aa19.08■□□□□ 0.65
USP39-208ENST00000455732 GRXCR2A6NFK2 248 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 K7ERI5 159 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 B4GALT3O60512 393 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 TBX10O75333 385 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 NPTXRO95502 500 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 NRIP1P48552 1158 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 ALDH7A1P49419 539 aaKnown RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 RAD51AP2Q09MP3 1159 aa19.08■□□□□ 0.64
USP39-208ENST00000455732 PUS10Q3MIT2 529 aaKnown RBP19.08■□□□□ 0.64
USP39-208ENST00000455732 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms