RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KANSL3Q9P2N6 904 aa20.57■□□□□ 0.88
UBE2D4-208ENST00000454350 INO80B-WBP1J3KQ70 363 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 NRP1O14786 923 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 ITGA4P13612 1032 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 ZXDAP98168 799 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 DSC1Q08554 894 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 ZNF174Q15697 407 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 KANK3Q6NY19 840 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 NOTUMQ6P988 496 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 COLGALT2Q8IYK4 626 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 RNF168Q8IYW5 571 aaPredicted RBP20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 GSTCDQ8NEC7 633 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 GAD1Q99259 594 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 POLR3CQ9BUI4 534 aaPredicted RBP20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 POMKQ9H5K3 350 aa20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 DBR1Q9UK59 544 aaKnown RBP20.56■□□□□ 0.88
UBE2D4-208ENST00000454350 ARL5CA6NH57 179 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 ALDH2P05091 517 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 RPA1P27694 616 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 HOXD11P31277 338 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 GIT2Q14161 759 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 TPRNQ4KMQ1 711 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 TRIM67Q6ZTA4 783 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 BMP8AQ7Z5Y6 402 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 C12orf76Q8N812 135 aaPredicted RBP20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 ZFP42Q96MM3 310 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 NXF3Q9H4D5 531 aaKnown RBP20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 FAN1Q9Y2M0 1017 aa20.55■□□□□ 0.88
UBE2D4-208ENST00000454350 A0A1B0GUA9 196 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 TTLL13PA6NNM8 815 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 F8W810 466 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 OR52Z1P0C646 297 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 MLH1P40692 756 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 ITIH3Q06033 890 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 ECM1Q16610 540 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 CDCA2Q69YH5 1023 aaPredicted RBP20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 CDR2LQ86X02 465 aaPredicted RBP20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 BSNDQ8WZ55 320 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 KLHL5Q96PQ7 755 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 DOCK6Q96HP0 2047 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 DOCK8Q8NF50 2099 aa20.54■□□□□ 0.88
UBE2D4-208ENST00000454350 CNPP09543 421 aaKnown RBP20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 WEE2P0C1S8 567 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 SCNN1GP51170 649 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 NBR1Q14596 966 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 BMS1Q14692 1282 aaKnown RBP20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 TTC38Q5R3I4 469 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 MAEAQ7L5Y9 396 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 TAS1R1Q7RTX1 841 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 NOSTRINQ8IVI9 506 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 NACC1Q96RE7 527 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 FZD8Q9H461 694 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 VWA8A3KMH1 1905 aa20.53■□□□□ 0.88
UBE2D4-208ENST00000454350 TMEM221A6NGB7 291 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 M0R296 226 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 SP100P23497 879 aaPredicted RBP20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 U2AF2P26368 475 aaKnown RBP eCLIP20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 CA8P35219 290 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 CLCN4P51793 760 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 PTPN21Q16825 1174 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 FAM187BQ17R55 369 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 RARS2Q5T160 578 aaKnown RBP20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 MCPH1Q8NEM0 835 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 ASIC4Q96FT7 647 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 FAM193BQ96PV7 902 aaPredicted RBP20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 DZANK1Q9NVP4 752 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 GIT1Q9Y2X7 761 aa20.52■□□□□ 0.88
UBE2D4-208ENST00000454350 ZMYM2Q9UBW7 1377 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 C2CD4DB7Z1M9 353 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 SOD2P04179 222 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 EDN1P05305 212 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 CYP11B2P19099 503 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 AKAP5P24588 427 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 TRAPPC10P48553 1259 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 FXR2P51116 673 aaKnown RBP eCLIP20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 KIAA1841Q6NSI8 718 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 CES5AQ6NT32 575 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 SLC27A1Q6PCB7 646 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 CCDC43Q96MW1 224 aaKnown RBP20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 NECTIN4Q96NY8 510 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 HERC2P3Q9BVR0 1158 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 APOL6Q9BWW8 343 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 CCDC113Q9H0I3 377 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 STK39Q9UEW8 545 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 PRG3Q9Y2Y8 225 aaPredicted RBP20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 MYH11P35749 1972 aa20.51■□□□□ 0.87
UBE2D4-208ENST00000454350 CACNA1HO95180 2353 aa20.5■□□□□ 0.87
UBE2D4-208ENST00000454350 LRRIQ4A6NIV6 560 aa20.5■□□□□ 0.87
UBE2D4-208ENST00000454350 NPTXRO95502 500 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms