RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 SKIP12755 728 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 MCM4P33991 863 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 RAB27AP51159 221 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 FAM189BP81408 668 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 FAM109BQ6ICB4 259 aaPredicted RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 FAM117BQ6P1L5 589 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 ZPBP2Q6X784 338 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 STXBP4Q6ZWJ1 553 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 BICD1Q96G01 975 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 EIF2AQ9BY44 585 aaKnown RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 TRIM6Q9C030 488 aaPredicted RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 ELAC1Q9H777 363 aaKnown RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
RBM39-219ENST00000453310 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 TNFSF13BQ9Y275 285 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 TRIOBPQ9H2D6 2365 aa17.2■□□□□ 0.34
RBM39-219ENST00000453310 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 HNRNPDLO14979 420 aaKnown RBP17.19■□□□□ 0.34
RBM39-219ENST00000453310 EIF3DO15371 548 aaKnown RBP eCLIP17.19■□□□□ 0.34
RBM39-219ENST00000453310 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
RBM39-219ENST00000453310 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 SMC2O95347 1197 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 GJB5O95377 273 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 NPTXRO95502 500 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 PIGRP01833 764 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
RBM39-219ENST00000453310 PSMD2Q13200 908 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 KCNB1Q14721 858 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 CRIPAKQ8N1N5 446 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
RBM39-219ENST00000453310 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 TMEM161AQ9NX61 479 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
RBM39-219ENST00000453310 GBF1Q92538 1859 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.18■□□□□ 0.34
RBM39-219ENST00000453310 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.18■□□□□ 0.34
RBM39-219ENST00000453310 ZNF623O75123 536 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 TOM1L1O75674 476 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 PROZP22891 400 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 LIG4P49917 911 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 KCNA1Q09470 495 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 STK4Q13043 487 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 DCAF4L1Q3SXM0 396 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 ZNF568Q3ZCX4 644 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 MPZL3Q6UWV2 235 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 EPM2AIP1Q7L775 607 aaPredicted RBP17.18■□□□□ 0.34
RBM39-219ENST00000453310 APBB1IPQ7Z5R6 666 aaPredicted RBP17.18■□□□□ 0.34
RBM39-219ENST00000453310 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
RBM39-219ENST00000453310 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 KIAA0895Q8NCT3 520 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 SPATA20Q8TB22 786 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 ZBED2Q9BTP6 218 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 CDT1Q9H211 546 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 PTPRHQ9HD43 1115 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 ANKFY1Q9P2R3 1169 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 EXOC7Q9UPT5 735 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 IPPQ9Y573 584 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 PCDHA5Q9Y5H7 936 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 UBE4BO95155 1302 aa17.18■□□□□ 0.34
RBM39-219ENST00000453310 ABLIM1O14639 778 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 EOMESO95936 686 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 RABGGTBP53611 331 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 CAMK4Q16566 473 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 LRIT3Q3SXY7 679 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
RBM39-219ENST00000453310 SMG8Q8ND04 991 aaKnown RBP17.17■□□□□ 0.34
RBM39-219ENST00000453310 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 PGBD4Q96DM1 585 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 ZBTB45Q96K62 511 aaPredicted RBP17.17■□□□□ 0.34
RBM39-219ENST00000453310 GSDMAQ96QA5 445 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 IKZF4Q9H2S9 585 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 CLSTN2Q9H4D0 955 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 NXF3Q9H4D5 531 aaKnown RBP17.17■□□□□ 0.34
RBM39-219ENST00000453310 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 RMND1Q9NWS8 449 aa17.17■□□□□ 0.34
RBM39-219ENST00000453310 COL4A6Q14031 1691 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 TLL1O43897 1013 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 DGKIO75912 1065 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 MBD3O95983 291 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 FGFR1P11362 822 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
RBM39-219ENST00000453310 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
RBM39-219ENST00000453310 SMAD3P84022 425 aaKnown RBP17.16■□□□□ 0.34
RBM39-219ENST00000453310 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
RBM39-219ENST00000453310 BMT2Q1RMZ1 405 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 SLC39A4Q6P5W5 647 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 ZBTB33Q86T24 672 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
RBM39-219ENST00000453310 SYCP3Q8IZU3 236 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms