RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 OTUD6AQ7L8S5 288 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 MRPL10Q7Z7H8 261 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 GPR149Q86SP6 731 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 ACSF2Q96CM8 615 aaPredicted RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 NAP1L4Q99733 375 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 TMEM175Q9BSA9 504 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 MAN1C1Q9NR34 630 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 USTQ9Y2C2 406 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 HES2Q9Y543 173 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 IPPQ9Y573 584 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 F8W810 466 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 TBX3O15119 743 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-210ENST00000453030 SOD2P04179 222 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 ALDH2P05091 517 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-210ENST00000453030 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
GARNL3-210ENST00000453030 SCNN1GP51170 649 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 FOSBP53539 338 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 NOTUMQ6P988 496 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 SLFN12Q8IYM2 578 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
GARNL3-210ENST00000453030 GAD1Q99259 594 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 IRF2BPLQ9H1B7 796 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 ZSWIM4Q9H7M6 989 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 XPNPEP1Q9NQW7 623 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 STK39Q9UEW8 545 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
GARNL3-210ENST00000453030 ARL5CA6NH57 179 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 ASAP2O43150 1006 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 ST18O60284 1047 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 PFKFB2O60825 505 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
GARNL3-210ENST00000453030 CTDNEP1O95476 244 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 ADH1AP07327 375 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 KRT2P35908 639 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 GLUD2P49448 558 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 CAPSQ13938 189 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 CNNM3Q8NE01 707 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 ASAP3Q8TDY4 903 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 RPS6KC1Q96S38 1066 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 EIF2AK1Q9BQI3 630 aaKnown RBP13□□□□□ -0.33
GARNL3-210ENST00000453030 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
GARNL3-210ENST00000453030 RNF39Q9H2S5 420 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
GARNL3-210ENST00000453030 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
GARNL3-210ENST00000453030 TEX28O15482 410 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 LILRB3O75022 631 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 GLUD1P00367 558 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 AXLP30530 894 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 PTENP60484 403 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 MBTD1Q05BQ5 628 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 TFDP1Q14186 410 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 MXD4Q14582 209 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-210ENST00000453030 CALCRLQ16602 461 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 CWF19L1Q69YN2 538 aaKnown RBP12.99□□□□□ -0.33
GARNL3-210ENST00000453030 ASTLQ6HA08 431 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-210ENST00000453030 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 CDR2LQ86X02 465 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-210ENST00000453030 COLGALT2Q8IYK4 626 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 NECAB1Q8N987 351 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 CCDC51Q96ER9 411 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 UBN1Q9NPG3 1134 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 MIA3Q5JRA6 1907 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 GVINP1Q7Z2Y8 2422 aa12.99□□□□□ -0.33
GARNL3-210ENST00000453030 WNT7AO00755 349 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 INPPL1O15357 1258 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 B4GALT5O43286 388 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
GARNL3-210ENST00000453030 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
GARNL3-210ENST00000453030 RFPL2O75678 378 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 SLITRK3O94933 977 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 LARGE1O95461 756 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 ARF4P18085 180 aaPredicted RBP12.98□□□□□ -0.33
GARNL3-210ENST00000453030 AKAP5P24588 427 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 GBP2P32456 591 aaPredicted RBP12.98□□□□□ -0.33
GARNL3-210ENST00000453030 NUBP1P53384 320 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 DSC1Q08554 894 aa12.98□□□□□ -0.33
GARNL3-210ENST00000453030 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms