RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 APOL6Q9BWW8 343 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 PHF7Q9BWX1 381 aaPredicted RBP14.28□□□□□ -0.12
CHD3-206ENST00000452447 ZBP1Q9H171 429 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 C11orf16Q9NQ32 467 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 LRWD1Q9UFC0 647 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 RAPGEFL1Q9UHV5 662 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 FAN1Q9Y2M0 1017 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 HES2Q9Y543 173 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 HCFC2Q9Y5Z7 792 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 MYO10Q9HD67 2058 aa14.28□□□□□ -0.12
CHD3-206ENST00000452447 ARL5CA6NH57 179 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 CTSAP10619 480 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 MLH1P40692 756 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 PTGDRQ13258 359 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 PDIA5Q14554 519 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 SLC27A1Q6PCB7 646 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 RNF135Q8IUD6 432 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 AUTS2Q8WXX7 1259 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 RPGRIP1Q96KN7 1286 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 GAD1Q99259 594 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.12
CHD3-206ENST00000452447 HCN4Q9Y3Q4 1203 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 IRAK3Q9Y616 596 aa14.27□□□□□ -0.12
CHD3-206ENST00000452447 A0A1B0GUA9 196 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 PRR33A8MZF0 331 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 LAD1O00515 517 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 NRP1O14786 923 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 B4GALT5O43286 388 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 CLASP2O75122 1294 aaKnown RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 NR1I2O75469 434 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 CYP11B2P19099 503 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 OR1G1P47890 313 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 CBX2Q14781 532 aaPredicted RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 TMEM132AQ24JP5 1023 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 CES5AQ6NT32 575 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 SYCE2Q6PIF2 218 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 C4orf32Q8N8J7 132 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 BCL7CQ8WUZ0 217 aaPredicted RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 SUSD6Q92537 303 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 APOL5Q9BWW9 433 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 C2orf40Q9H1Z8 148 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 S1PR5Q9H228 398 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 MUTYHQ9UIF7 546 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 LOC730098B7Z3J9 87 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 H3BQV1 296 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 B4GALT3O60512 393 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 NPTXRO95502 500 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 MAPK6Q16659 721 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 DEPTORQ8TB45 409 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 IFT74Q96LB3 600 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 ZFP42Q96MM3 310 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 BHMT2Q9H2M3 363 aa14.26□□□□□ -0.13
CHD3-206ENST00000452447 NXF3Q9H4D5 531 aaKnown RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
CHD3-206ENST00000452447 TECTAO75443 2155 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 INPPL1O15357 1258 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHD3-206ENST00000452447 AKAP5P24588 427 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 NAMPTP43490 491 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 MCM2P49736 904 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 SCNN1GP51170 649 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 ITIH3Q06033 890 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 ECM1Q16610 540 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
CHD3-206ENST00000452447 CDCA2Q69YH5 1023 aaPredicted RBP14.25□□□□□ -0.13
CHD3-206ENST00000452447 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 PPFIBP1Q86W92 1011 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 COLGALT2Q8IYK4 626 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 IGSF22Q8N9C0 903 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 EMILIN2Q9BXX0 1053 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
CHD3-206ENST00000452447 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
CHD3-206ENST00000452447 PARP2Q9UGN5 583 aa14.25□□□□□ -0.13
CHD3-206ENST00000452447 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 LIG1P18858 919 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 GJB2P29033 226 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
CHD3-206ENST00000452447 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 FAM187BQ17R55 369 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 KRT79Q5XKE5 535 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 BSNDQ8WZ55 320 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 KIFAP3Q92845 792 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 RPS6KC1Q96S38 1066 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
CHD3-206ENST00000452447 ADAM7Q9H2U9 754 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms