RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 GATMP50440 423 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 CACNB1Q02641 598 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-202ENST00000452372 GIT2Q14161 759 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 PTPROQ16827 1216 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 TCEAL5Q5H9L2 206 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 RESP18Q5W5W9 173 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 MRPL10Q7Z7H8 261 aaKnown RBP21.98■■□□□ 1.11
COL9A3-202ENST00000452372 RNF169Q8NCN4 708 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 KHSRPQ92945 711 aaKnown RBP eCLIP21.98■■□□□ 1.11
COL9A3-202ENST00000452372 RNF19AQ9NV58 838 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 LARSQ9P2J5 1176 aaKnown RBP21.98■■□□□ 1.11
COL9A3-202ENST00000452372 ARHGAP28Q9P2N2 729 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 PCDHB2Q9Y5E7 798 aa21.98■■□□□ 1.11
COL9A3-202ENST00000452372 K7ERI5 159 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 PRKCBP05771 671 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 KRT18P05783 430 aaKnown RBP21.97■■□□□ 1.11
COL9A3-202ENST00000452372 KCNA5P22460 613 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 SMTNP53814 917 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 TMEM117Q9H0C3 514 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 EPHX3Q9H6B9 360 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 TMEM134Q9H6X4 195 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 PHLPP2Q6ZVD8 1323 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 CNTNAP2Q9UHC6 1331 aa21.97■■□□□ 1.11
COL9A3-202ENST00000452372 TBKBP1A7MCY6 615 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 COL9A1P20849 921 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 CTNNB1P35222 781 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 ZNF131P52739 623 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 PRPF4BQ13523 1007 aaKnown RBP21.96■■□□□ 1.11
COL9A3-202ENST00000452372 CAMK1Q14012 370 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 E2F4Q16254 413 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 PAN2Q504Q3 1202 aaKnown RBP21.96■■□□□ 1.11
COL9A3-202ENST00000452372 ADALQ6DHV7 355 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 CNNM3Q8NE01 707 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 PGBD4Q96DM1 585 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 PARVGQ9HBI0 331 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 FAM13BQ9NYF5 915 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 RAPGEFL1Q9UHV5 662 aa21.96■■□□□ 1.11
COL9A3-202ENST00000452372 MYMKA6NI61 221 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 TTLL13PA6NNM8 815 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 SLC16A4O15374 487 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 FAM13AO94988 1023 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 LIG1P18858 919 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 TIGD5Q53EQ6 642 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 CLLU1OSQ5K130 101 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 SLC27A1Q6PCB7 646 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 ABI1Q8IZP0 508 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 IQUBQ8NA54 791 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 RSPH1Q8WYR4 309 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 LPPQ93052 612 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 CASD1Q96PB1 797 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 EIF2AQ9BY44 585 aaKnown RBP21.95■■□□□ 1.1
COL9A3-202ENST00000452372 CUEDC2Q9H467 287 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 CIZ1Q9ULV3 898 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-202ENST00000452372 RWDD3Q9Y3V2 267 aa21.95■■□□□ 1.1
COL9A3-202ENST00000452372 MRPL42Q9Y6G3 142 aaKnown RBP21.95■■□□□ 1.1
COL9A3-202ENST00000452372 KIAA1671Q9BY89 1806 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 EDN1P05305 212 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 CMA1P23946 247 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 LTBRP36941 435 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 TAS1R3Q7RTX0 852 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 CDR2LQ86X02 465 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-202ENST00000452372 FAM178BQ8IXR5 827 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 MYCT1Q8N699 235 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 SMG8Q8ND04 991 aaKnown RBP21.94■■□□□ 1.1
COL9A3-202ENST00000452372 TMEM161BQ8NDZ6 487 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 DDX12PQ92771 950 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 KCNN1Q92952 543 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 NSUN3Q9H649 340 aaKnown RBP21.94■■□□□ 1.1
COL9A3-202ENST00000452372 PLAGL2Q9UPG8 496 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 IPPQ9Y573 584 aa21.94■■□□□ 1.1
COL9A3-202ENST00000452372 C5orf42Q9H799 3197 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 GRXCR2A6NFK2 248 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 MEIS3P2A8K0S8 358 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 H0YCG3 227 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 N4BP3O15049 544 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 POLR2DO15514 142 aaKnown RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 TBCAO75347 108 aaKnown RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 NCKAP1LP55160 1127 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 CTC1Q2NKJ3 1217 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 LONRF3Q496Y0 759 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 NT5DC1Q5TFE4 455 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 AGMOQ6ZNB7 445 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 DYMQ7RTS9 669 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 HELQQ8TDG4 1101 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 DHX58Q96C10 678 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 DNAJC19Q96DA6 116 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 PABPC5Q96DU9 382 aaKnown RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 C11orf84Q9BUA3 381 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 TRIM6Q9C030 488 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 TNMDQ9H2S6 317 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 PDZD7Q9H5P4 517 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 TYW1Q9NV66 732 aaKnown RBP21.93■■□□□ 1.1
COL9A3-202ENST00000452372 KBTBD4Q9NVX7 518 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 USP20Q9Y2K6 914 aa21.93■■□□□ 1.1
COL9A3-202ENST00000452372 H3BQ06 376 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-202ENST00000452372 TRAK2O60296 914 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 OFD1O75665 1012 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 MAPTP10636 758 aaKnown RBP21.92■■□□□ 1.1
COL9A3-202ENST00000452372 IL9P15248 144 aa21.92■■□□□ 1.1
COL9A3-202ENST00000452372 SCP2P22307 547 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms