RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 EEF1DP3Q658K8 133 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 ZBTB8OSQ8IWT0 167 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 ABI1Q8IZP0 508 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 RAD54LQ92698 747 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 IFT74Q96LB3 600 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 DRC1Q96MC2 740 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 ASB2Q96Q27 587 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 MRPL9Q9BYD2 267 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 NXF3Q9H4D5 531 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 RSAD1Q9HA92 442 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 THEGQ9P2T0 379 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 TFIP11Q9UBB9 837 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 COG5Q9UP83 839 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 MUC3AQ02505 3323 aa17.78■□□□□ 0.44
SCAMP4-205ENST00000452128 A0A087X0B3 334 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 F13A1P00488 732 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 PLS3P13797 630 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 LTBRP36941 435 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 DSC1Q08554 894 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 NCBP1Q09161 790 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 GIT2Q14161 759 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 MCM6Q14566 821 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 TMEM161BQ8NDZ6 487 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 CALML4Q96GE6 196 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 ZNF558Q96NG5 402 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 FIZ1Q96SL8 496 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 UBN1Q9NPG3 1134 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 SPG21Q9NZD8 308 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 GIT1Q9Y2X7 761 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
SCAMP4-205ENST00000452128 NCOR1O75376 2440 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ARL5CA6NH57 179 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 PPP6R2O75170 966 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 NPTXRO95502 500 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 YEATS4O95619 227 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ITGA4P13612 1032 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 PROZP22891 400 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 PRPF4BQ13523 1007 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 AXDND1Q5T1B0 1012 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ADGRD2Q7Z7M1 963 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 HLA-CQ95604 372 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 GAD1Q99259 594 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ACO2Q99798 780 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 CXCL16Q9H2A7 254 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 KANSL3Q9P2N6 904 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 DNAJB4Q9UDY4 337 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 TNFSF13BQ9Y275 285 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ZMYM2Q9UBW7 1377 aa17.76■□□□□ 0.43
SCAMP4-205ENST00000452128 ATG2AQ2TAZ0 1938 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 K7ERI5 159 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 BRD1O95696 1058 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 MAPTP10636 758 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 GTF2F1P35269 517 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 SLC11A1P49279 550 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 RAD51AP2Q09MP3 1159 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 ADAM15Q13444 863 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 KCNC3Q14003 757 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 SPOUT1Q5T280 376 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 PABPC5Q96DU9 382 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 CDK5RAP3Q96JB5 506 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 ZFP42Q96MM3 310 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 REEP2Q9BRK0 252 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 UBE2ZQ9H832 354 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
SCAMP4-205ENST00000452128 CCDC169A6NNP5 214 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 N4BP3O15049 544 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 SPTLC2O15270 562 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 SLC16A4O15374 487 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 AKAP5P24588 427 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 PPM1AP35813 382 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 NCKAP1LP55160 1127 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 DMP1Q13316 513 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 NAB2Q15742 525 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 TJAP1Q5JTD0 557 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 ATL3Q6DD88 541 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 PDE12Q6L8Q7 609 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 GPBP1Q86WP2 473 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 THNSL1Q8IYQ7 743 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 ZNF396Q96N95 335 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 COL25A1Q9BXS0 654 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 KMT5AQ9NQR1 393 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 STK17AQ9UEE5 414 aa17.74■□□□□ 0.43
SCAMP4-205ENST00000452128 INPP5FQ9Y2H2 1132 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms