RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ATF7IP2Q5U623 682 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 TWF2Q6IBS0 349 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 EPM2AIP1Q7L775 607 aaPredicted RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 HVCN1Q96D96 273 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 EIF2AQ9BY44 585 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 MRPL4Q9BYD3 311 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 GTPBP4Q9BZE4 634 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 GDAQ9Y2T3 454 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 TISP43B9A030 160 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 ABLIM1O14639 778 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 N4BP3O15049 544 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 EFCAB14O75071 495 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 NPTXRO95502 500 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 PIGRP01833 764 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 HOXD13P35453 343 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 KCNJ6P48051 423 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 PSMD2Q13200 908 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
VPS33A-202ENST00000451053 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-202ENST00000451053 SLC24A5Q71RS6 500 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-202ENST00000451053 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 BICD1Q96G01 975 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-202ENST00000451053 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
VPS33A-202ENST00000451053 PTPRHQ9HD43 1115 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 C1orf112Q9NSG2 853 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 MAN1B1Q9UKM7 699 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 TNFSF13BQ9Y275 285 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 ZMYM2Q9UBW7 1377 aa14.29□□□□□ -0.12
VPS33A-202ENST00000451053 ANKRD63C9JTQ0 380 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 BIN1O00499 593 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 HNRNPDLO14979 420 aaKnown RBP14.28□□□□□ -0.12
VPS33A-202ENST00000451053 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS33A-202ENST00000451053 AMHP03971 560 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 PROZP22891 400 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ABCD1P33897 745 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 LIG4P49917 911 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 FAM189BP81408 668 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 STX1AQ16623 288 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 SLC27A1Q6PCB7 646 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ECHDC2Q86YB7 292 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
VPS33A-202ENST00000451053 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 MYOCDQ8IZQ8 938 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 SMG8Q8ND04 991 aaKnown RBP14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ZNF507Q8TCN5 953 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 TRAIPQ9BWF2 469 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 FAM105AQ9NUU6 356 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 ANO10Q9NW15 660 aa14.28□□□□□ -0.12
VPS33A-202ENST00000451053 UBE4BO95155 1302 aa14.27□□□□□ -0.12
VPS33A-202ENST00000451053 A0A0U1RQF3 1178 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 TOM1L1O75674 476 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 CAVIN2O95810 425 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.13
VPS33A-202ENST00000451053 RAB27AP51159 221 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 TYRO3Q06418 890 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.13
VPS33A-202ENST00000451053 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 MPZL3Q6UWV2 235 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 ZBTB33Q86T24 672 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.13
VPS33A-202ENST00000451053 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 CRIPAKQ8N1N5 446 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 RNF169Q8NCN4 708 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 CDT1Q9H211 546 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 TSPY26PQ9H489 355 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 NXF3Q9H4D5 531 aaKnown RBP14.27□□□□□ -0.13
VPS33A-202ENST00000451053 ANKFY1Q9P2R3 1169 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 EXOC7Q9UPT5 735 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
VPS33A-202ENST00000451053 HES2Q9Y543 173 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 IPPQ9Y573 584 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 PCDHB2Q9Y5E7 798 aa14.27□□□□□ -0.13
VPS33A-202ENST00000451053 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 GRXCR1A8MXD5 290 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 UPP2O95045 317 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
VPS33A-202ENST00000451053 BMP6P22004 513 aa14.26□□□□□ -0.13
VPS33A-202ENST00000451053 MORC3Q14149 939 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms