RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 FAM187AA6NFU0 413 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 DHX34Q14147 1143 aaKnown RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 TAX1BP1Q86VP1 789 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ZSWIM1Q9BR11 485 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 DNAI2Q9GZS0 605 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 MTRF1LQ9UGC7 380 aaKnown RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 CYP26A1O43174 497 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ANKRD20A8PQ5CZ79 823 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 DAW1Q8N136 415 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 MGARPQ8TDB4 240 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 TATDN2Q93075 761 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ATP8B3O60423 1300 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ANKRD63C9JTQ0 380 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 PYGMP11217 842 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 ZNF131P52739 623 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 AOC3Q16853 763 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 OTUD6AQ7L8S5 288 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
SYVN1-204ENST00000449943 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
SYVN1-204ENST00000449943 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 DRD4P21917 467 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 SNX1Q13596 522 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 PPP2R5EQ16537 467 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 DBR1Q9UK59 544 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 CHRNA3P32297 505 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 LMO3Q8TAP4 145 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 PRMT1Q99873 361 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 FAM129AQ9BZQ8 928 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 GRHL1Q9NZI5 618 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 UBE4BO95155 1302 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 RPTORQ8N122 1335 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 CALCAP01258 141 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 MXI1P50539 228 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 NFIL3Q16649 462 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 ZNF653Q96CK0 615 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 HVCN1Q96D96 273 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
SYVN1-204ENST00000449943 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
SYVN1-204ENST00000449943 PTGIRP43119 386 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 SMTNP53814 917 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 SAAL1Q96ER3 474 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 HSPBP1Q9NZL4 362 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 LY75O60449 1722 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 MIF4GDA9UHW6 222 aaKnown RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 SLC16A4O15374 487 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 SCTRP47872 440 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 ZNF564Q8TBZ8 553 aaPredicted RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 ACTR5Q9H9F9 607 aaPredicted RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 LRRC14Q15048 493 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 TRIP13Q15645 432 aaPredicted RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 CCDC197Q8NCU1 140 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 C1orf54Q8WWF1 131 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 ELAC2Q9BQ52 826 aaKnown RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 GGA2Q9UJY4 613 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 ACSL3O95573 720 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
SYVN1-204ENST00000449943 PAEPP09466 180 aa12.16□□□□□ -0.46
SYVN1-204ENST00000449943 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms