RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ERICH2A1L162 156 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 IFIT3O14879 490 aaKnown RBP14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 ECI2O75521 394 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 HNRNPA1P09651 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 CDC42EP1Q00587 391 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 CCDC6Q16204 474 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 HEATR6Q6AI08 1181 aaKnown RBP14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 LY9Q9HBG7 655 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 MARCH5Q9NX47 278 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 POLIQ9UNA4 740 aa14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 MYH9P35579 1960 aaKnown RBP14.22□□□□□ -0.13
AC004540.1-204ENST00000449537 SALL3Q9BXA9 1300 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 MEIS1O00470 390 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 POMCP01189 267 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 SFPQP23246 707 aaKnown RBP eCLIP14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 OR1G1P47890 313 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 AFF1P51825 1210 aaKnown RBP14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 ZNF252P-AS1Q0IIN9 211 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 RNF43Q68DV7 783 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 AGMOQ6ZNB7 445 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 CATIPQ7Z7H3 387 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 RNF168Q8IYW5 571 aaPredicted RBP14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 DNASE1L2Q92874 299 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 LOXL4Q96JB6 756 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 PLA2G2FQ9BZM2 168 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 INO80BQ9C086 356 aaPredicted RBP14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 ANKFY1Q9P2R3 1169 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 PCDHB2Q9Y5E7 798 aa14.21□□□□□ -0.13
AC004540.1-204ENST00000449537 DSPP15924 2871 aaKnown RBP14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 GIPC1O14908 333 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 EFEMP2O95967 443 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 TOP3BO95985 862 aaKnown RBP14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 TRDNQ13061 729 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 PPM1LQ5SGD2 360 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 GPR65Q8IYL9 337 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 SPEM1Q8N4L4 309 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 FAM3CQ92520 227 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 FAM167AQ96KS9 214 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 RSAD1Q9HA92 442 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 NRBP2Q9NSY0 501 aa14.2□□□□□ -0.14
AC004540.1-204ENST00000449537 CCL16O15467 120 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 XYLBO75191 536 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 NR1I2O75469 434 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 PSAPP07602 524 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 SDSP20132 328 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 ZNF76P36508 570 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 PDE1AP54750 535 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 LIN9Q5TKA1 542 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 NPAS3Q8IXF0 933 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 COLGALT2Q8IYK4 626 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 B3GALT6Q96L58 329 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 MBOAT7Q96N66 472 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 LZTS2Q9BRK4 669 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 DSCC1Q9BVC3 393 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 ASH1LQ9NR48 2969 aaKnown RBP14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 GABBR1Q9UBS5 961 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 PCDHA10Q9Y5I2 948 aa14.19□□□□□ -0.14
AC004540.1-204ENST00000449537 NBEAQ8NFP9 2946 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 DHX15O43143 795 aaKnown RBP14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 CHRNB1P11230 501 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 RPL17P18621 184 aaKnown RBP14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 CREMQ03060 361 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 CATSPER4Q7RTX7 472 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 MCRS1Q96EZ8 462 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 COLEC11Q9BWP8 271 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 BRD9Q9H8M2 597 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
AC004540.1-204ENST00000449537 A0A087WZ62 844 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 K7ESF4 209 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 EPN2O95208 641 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 PAPSS2O95340 614 aaPredicted RBP14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 HOXA9P31269 272 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 GNAQP50148 359 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 GAS6Q14393 721 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 SART3Q15020 963 aaKnown RBP14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 PLA2G2CQ5R387 149 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 DAB2IPQ5VWQ8 1189 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 TANGO2Q6ICL3 276 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 ZNF746Q6NUN9 644 aaPredicted RBP14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 CWC27Q6UX04 472 aaKnown RBP14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 PLA2G4DQ86XP0 818 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 ELSPBP1Q96BH3 223 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 MAP3K14Q99558 947 aa14.17□□□□□ -0.14
AC004540.1-204ENST00000449537 FDXACB1Q9BRP7 624 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms