RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 MAP7Q14244 749 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 KIAA1755Q5JYT7 1200 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 C2orf40Q9H1Z8 148 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 LCMT1Q9UIC8 334 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 HMGCS2P54868 508 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 ATG16L1Q676U5 607 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 ABI1Q8IZP0 508 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 BBS5Q8N3I7 341 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 NCAPGQ9BPX3 1015 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 TRIM55Q9BYV6 548 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 Q9H521 79 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 JPH1Q9HDC5 661 aaPredicted RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 TOPORSQ9NS56 1045 aaPredicted RBP11.09□□□□□ -0.63
CTC1-202ENST00000449476 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CTC1-202ENST00000449476 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.63
CTC1-202ENST00000449476 DGAT1O75907 488 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 DCTN3O75935 186 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 CYP2C19P33261 490 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 TMPRSS15P98073 1019 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 BAATQ14032 418 aaPredicted RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 LRRC14Q15048 493 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 DUOXA2Q1HG44 320 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 MMS22LQ6ZRQ5 1243 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 BARGINQ6ZT62 677 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 SLC30A5Q8TAD4 765 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 ANKS1AQ92625 1134 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 SNF8Q96H20 258 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 ARHGEF28Q8N1W1 1705 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 SDC4P31431 198 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 GRB10Q13322 594 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 RASIP1Q5U651 963 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 IZUMO3Q5VZ72 239 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 ADGRA1Q86SQ6 560 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 CATSPER3Q86XQ3 398 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 CHMP6Q96FZ7 201 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 TRIM51Q9BSJ1 452 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 KBTBD4Q9NVX7 518 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 KCND2Q9NZV8 630 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 KRT38O76015 456 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 KRT17Q04695 432 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 THOC5Q13769 683 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 SPOPLQ6IQ16 392 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 DSTYKQ6XUX3 929 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 G3BP2Q9UN86 482 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 BAZ2BQ9UIF8 2168 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 M0QYV0 167 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 WDR46O15213 610 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 PEX19P40855 299 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 CARSP49589 748 aaKnown RBP11.08□□□□□ -0.64
CTC1-202ENST00000449476 HVCN1Q96D96 273 aa11.08□□□□□ -0.64
CTC1-202ENST00000449476 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 TCRBV5S4A2TA0A5A2 114 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 PDIA2Q13087 525 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 MTMR2Q13614 643 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 PKN1Q16512 942 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 SNRNP35Q16560 246 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 KLHL38Q2WGJ6 581 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ARL13BQ3SXY8 428 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 KLHDC7AQ5VTJ3 777 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 TTI2Q6NXR4 508 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 SYT2Q8N9I0 419 aaPredicted RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 LPAR1Q92633 364 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 MKNK1Q9BUB5 465 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 GOLPH3Q9H4A6 298 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 UVRAGQ9P2Y5 699 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 HPCAL4Q9UM19 191 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 FGFR4P22455 802 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ACOT2P49753 483 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 KIF22Q14807 665 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 TAF11Q15544 211 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 XKR3Q5GH77 459 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 SLC10A5Q5PT55 438 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 JADE1Q6IE81 842 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 PARVAQ9NVD7 372 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 GOLGA8QA0A0J9YX86 632 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 GOLGA8OA6NCC3 632 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 GOLGA8NF8WBI6 632 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 CYP11B2P19099 503 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 NCF2P19878 526 aaPredicted RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 BYSLQ13895 437 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 CRLF3Q8IUI8 442 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ATL2Q8NHH9 583 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 FBXO41Q8TF61 875 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms