RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 GPR20Q99678 358 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 NIFKQ9BYG3 293 aaKnown RBP17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 GPR88Q9GZN0 384 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 DHX33Q9H6R0 707 aaKnown RBP17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 C17orf75Q9HAS0 396 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 N4BP1O75113 896 aaKnown RBP17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ADORA2AP29274 412 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 PLA2G4AP47712 749 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 C1orf220Q5T0J3 134 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 FAM160B1Q5W0V3 765 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 CCDC62Q6P9F0 684 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ARMCX2Q7L311 632 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ZNF572Q7Z3I7 529 aaPredicted RBP17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 HVCN1Q96D96 273 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ABCB6Q9NP58 842 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 NENFQ9UMX5 172 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 DAAM1Q9Y4D1 1078 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 DDX3XO00571 662 aaKnown RBP eCLIP17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 P4HA2O15460 535 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 LRRN2O75325 713 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 RFX1P22670 979 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 GLRA2P23416 452 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 GCLMP48507 274 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 RTP1P59025 263 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 FKBP1BP68106 108 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ITIH3Q06033 890 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 C2orf54Q08AI8 447 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 GJC2Q5T442 439 aaPredicted RBP17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 CST9Q5W186 159 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ANKRD23Q86SG2 305 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 FMNL3Q8IVF7 1028 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 MORC4Q8TE76 937 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 GLG1Q92896 1179 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
AP000253.1-201ENST00000449339 NOP56O00567 594 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 FTCDO95954 541 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 TXNP10599 105 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 CCNA1P78396 465 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 DRP2Q13474 957 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 TARBP2Q15633 366 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 CCDC181Q5TID7 509 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 DNAAF5Q86Y56 855 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 NRBP2Q9NSY0 501 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 GRID2IPA4D2P6 1211 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 CCDC172P0C7W6 258 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 SNRNP35Q16560 246 aaKnown RBP17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 ARHGAP44Q17R89 818 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 SPATA4Q8NEY3 305 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 SLC7A3Q8WY07 619 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 AZI2Q9H6S1 392 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 SLC45A1Q9Y2W3 748 aa17.44■□□□□ 0.38
AP000253.1-201ENST00000449339 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 ARL2P36404 184 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 MEI1Q5TIA1 1274 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 KCNV1Q6PIU1 500 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 GLYCTKQ8IVS8 523 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 BICD1Q96G01 975 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 ATP8B3O60423 1300 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 ASB14A6NK59 587 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 H2AFZP0C0S5 128 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 MCM3P25205 808 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 PAFAH1B1P43034 410 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 MXI1P50539 228 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 H2AFVQ71UI9 128 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 SLC30A5Q8TAD4 765 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 OLIG1Q8TAK6 271 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 LNX1Q8TBB1 728 aaPredicted RBP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 POMGNT1Q8WZA1 660 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 CCDC127Q96BQ5 260 aa17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 POP1Q99575 1024 aaKnown RBP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 UBE2TQ9NPD8 197 aaPredicted RBP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.38
AP000253.1-201ENST00000449339 FOXN3O00409 490 aaPredicted RBP17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 MAP2K7O14733 419 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 NOP2P46087 812 aaKnown RBP17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 IFI16Q16666 785 aaKnown RBP17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 MMGT1Q8N4V1 131 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 SYT11Q9BT88 431 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 TMEM117Q9H0C3 514 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 SUGCTQ9HAC7 445 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 MORF4L1Q9UBU8 362 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 INTUQ9ULD6 942 aa17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 PACSIN2Q9UNF0 486 aaPredicted RBP17.42■□□□□ 0.38
AP000253.1-201ENST00000449339 PMM2O15305 246 aa17.41■□□□□ 0.38
AP000253.1-201ENST00000449339 LGR5O75473 907 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms