RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 YTHDF3Q7Z739 585 aaKnown RBP13.89□□□□□ -0.19
SHC1-210ENST00000448116 SEC14L1Q92503 715 aa13.89□□□□□ -0.19
SHC1-210ENST00000448116 VEZTQ9HBM0 779 aa13.89□□□□□ -0.19
SHC1-210ENST00000448116 GPRC5CQ9NQ84 441 aa13.89□□□□□ -0.19
SHC1-210ENST00000448116 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SHC1-210ENST00000448116 DBR1Q9UK59 544 aaKnown RBP13.89□□□□□ -0.19
SHC1-210ENST00000448116 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 DNM1LO00429 736 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 SLC16A4O15374 487 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 PHF2O75151 1096 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ZNF131P52739 623 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 DHX34Q14147 1143 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 CC2D2BQ6DHV5 1058 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ZDHHC24Q6UX98 284 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 LMO3Q8TAP4 145 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 MGARPQ8TDB4 240 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 EPS8L3Q8TE67 593 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ZSWIM1Q9BR11 485 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 SLC40A1Q9NP59 571 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 KLC4Q9NSK0 619 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 HAUS2Q9NVX0 235 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 CALCAP01258 141 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 MXI1P50539 228 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 PEX3P56589 373 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 SAAL1Q96ER3 474 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 POP1Q99575 1024 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 NCAPGQ9BPX3 1015 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 CHRNA3P32297 505 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 BYSLQ13895 437 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 OTUD6AQ7L8S5 288 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 NOP9Q86U38 636 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 AGBL1Q96MI9 1066 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 ACCSQ96QU6 501 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 NUP85Q9BW27 656 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
SHC1-210ENST00000448116 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
SHC1-210ENST00000448116 MIF4GDA9UHW6 222 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 RDXP35241 583 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 TRAF1Q13077 416 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 TRIP13Q15645 432 aaPredicted RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 TATDN2Q93075 761 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 PAGR1Q9BTK6 254 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 TCEAL9Q9UHQ7 104 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 SERPINA10Q9UK55 444 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 AFF2P51816 1311 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 ITGB5P18084 799 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 NFIL3Q16649 462 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 EPC2Q52LR7 807 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 CEP57Q86XR8 500 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 C1orf54Q8WWF1 131 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 ELAC2Q9BQ52 826 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 EPB41L4BQ9H329 900 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 RTN2O75298 545 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 DRD4P21917 467 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 CHRNA5P30532 468 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 PTGIRP43119 386 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 VPS41P49754 854 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 TLCD1Q96CP7 247 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 FAM84AQ96KN4 292 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 CEP89Q96ST8 783 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 GLIS2Q9BZE0 524 aaPredicted RBP13.87□□□□□ -0.19
SHC1-210ENST00000448116 KCNH7Q9NS40 1196 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 TAF1LQ8IZX4 1826 aa13.87□□□□□ -0.19
SHC1-210ENST00000448116 ACSL3O95573 720 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 TNIP1Q15025 636 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 ERMARDQ5T6L9 678 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 FAM102BQ5T8I3 360 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 CBWD2Q8IUF1 395 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 CCDC197Q8NCU1 140 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 HVCN1Q96D96 273 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 KIFC3Q9BVG8 833 aa13.86□□□□□ -0.19
SHC1-210ENST00000448116 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms