RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 IPO9Q96P70 1041 aaKnown RBP7.14□□□□□ -1.27
USP49-205ENST00000448078 ASB2Q96Q27 587 aa7.14□□□□□ -1.27
USP49-205ENST00000448078 OSBPL5Q9H0X9 879 aaPredicted RBP7.14□□□□□ -1.27
USP49-205ENST00000448078 SLC5A4Q9NY91 659 aa7.14□□□□□ -1.27
USP49-205ENST00000448078 MARCH2Q9P0N8 246 aa7.14□□□□□ -1.27
USP49-205ENST00000448078 NUDT5Q9UKK9 219 aa7.14□□□□□ -1.27
USP49-205ENST00000448078 COL4A1P02462 1669 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 PFASO15067 1338 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 KIF16BQ96L93 1317 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 TEX51A0A1B0GUA7 166 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 C19orf81C9J6K1 198 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 RFXAPO00287 272 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 DNM1LO00429 736 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 TBX1O43435 398 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 TSPAN15O95858 294 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 CPP00450 1065 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 LDHCP07864 332 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 RGS3P49796 1198 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 CORO7P57737 925 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 DLG4P78352 724 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 IQCEQ6IPM2 695 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 DZIP1Q86YF9 867 aaKnown RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 PPIL6Q8IXY8 311 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 BHLHE22Q8NFJ8 381 aaPredicted RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 PPM1EQ8WY54 764 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 TRIB2Q92519 343 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 DIO2Q92813 273 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 RNPC3Q96LT9 517 aaKnown RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 UHRF1Q96T88 793 aaPredicted RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 NOL10Q9BSC4 688 aaKnown RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 IDI2Q9BXS1 227 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 THEGQ9P2T0 379 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 MORF4L1Q9UBU8 362 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 DENND2AQ9ULE3 1009 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 CNOT6Q9ULM6 557 aaKnown RBP7.13□□□□□ -1.27
USP49-205ENST00000448078 LAMA3Q16787 3333 aa7.13□□□□□ -1.27
USP49-205ENST00000448078 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
USP49-205ENST00000448078 DBX1A6NMT0 343 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 KLF4O43474 513 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 NUAK1O60285 661 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 HMGCS2P54868 508 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 GSTO1P78417 241 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 IFRD2Q12894 506 aaPredicted RBP7.12□□□□□ -1.27
USP49-205ENST00000448078 HSP90AA2PQ14568 343 aaPredicted RBP7.12□□□□□ -1.27
USP49-205ENST00000448078 AKNAD1Q5T1N1 836 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 TREML2Q5T2D2 321 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 SLC4A10Q6U841 1118 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 RPTNQ6XPR3 784 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 CCDC129Q6ZRS4 1044 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 G2E3Q7L622 706 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 TSPYL6Q8N831 410 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 ZNF513Q8N8E2 541 aaPredicted RBP7.12□□□□□ -1.27
USP49-205ENST00000448078 LPIN2Q92539 896 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 BADQ92934 168 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 MRGPRX3Q96LB0 322 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 RXFP1Q9HBX9 757 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 TNFRSF12AQ9NP84 129 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 DDX20Q9UHI6 824 aaKnown RBP7.12□□□□□ -1.27
USP49-205ENST00000448078 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 FAN1Q9Y2M0 1017 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 IRAK3Q9Y616 596 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 LAMB1P07942 1786 aa7.12□□□□□ -1.27
USP49-205ENST00000448078 ECM29Q5VYK3 1845 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 MYOCOSA0A1B0GUC4 107 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 C7orf72A4D263 438 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 CYBBP04839 570 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 ASNSP08243 561 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 GLDCP23378 1020 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 HOXA7P31268 230 aaPredicted RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 PPP2R2AP63151 447 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 ZNF200P98182 395 aaPredicted RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 KCNA10Q16322 511 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 PRSS53Q2L4Q9 553 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 MTERF2Q49AM1 385 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 BEND3Q5T5X7 828 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 ATF7IPQ6VMQ6 1270 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 SLC39A5Q6ZMH5 540 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 DPP9Q86TI2 863 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 LRRC47Q8N1G4 583 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 KCTD13Q8WZ19 329 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 P2RX7Q99572 595 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 IER2Q9BTL4 223 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 PUS3Q9BZE2 481 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 MTIF3Q9H2K0 278 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 KLHL14Q9P2G3 628 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 MSRAQ9UJ68 235 aa7.11□□□□□ -1.27
USP49-205ENST00000448078 SMG5Q9UPR3 1016 aaKnown RBP7.11□□□□□ -1.27
USP49-205ENST00000448078 AK9Q5TCS8 1911 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 SLC15A5A6NIM6 579 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 STRNO43815 780 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 DBHP09172 617 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 CCND3P30281 292 aaPredicted RBP7.1□□□□□ -1.27
USP49-205ENST00000448078 NCKAP1LP55160 1127 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 BACE1P56817 501 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 HERVK_113P62684 666 aa7.1□□□□□ -1.27
USP49-205ENST00000448078 KCNAB2Q13303 367 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms