RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.41
OTUB1-204ENST00000447683 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
OTUB1-204ENST00000447683 TAS2R14Q9NYV8 317 aa17.61■□□□□ 0.41
OTUB1-204ENST00000447683 PPP2R3BQ9Y5P8 575 aa17.61■□□□□ 0.41
OTUB1-204ENST00000447683 PFASO15067 1338 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 DENND3A2RUS2 1198 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 GOLGA8IPA6NC78 632 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 GOLGA8JA6NMD2 632 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 TMCO5BA8MYB1 307 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 PGRMC1O00264 195 aaKnown RBP17.6■□□□□ 0.41
OTUB1-204ENST00000447683 BUB1BO60566 1050 aaPredicted RBP17.6■□□□□ 0.41
OTUB1-204ENST00000447683 PHACTR2O75167 634 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
OTUB1-204ENST00000447683 PARD3BQ8TEW8 1205 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 JPH1Q9HDC5 661 aaPredicted RBP17.6■□□□□ 0.41
OTUB1-204ENST00000447683 AMFRQ9UKV5 643 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 COQ4Q9Y3A0 265 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 AFG3L2Q9Y4W6 797 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 GOLGA6BA6NDN3 693 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 SPATA31C2B4DYI2 1134 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 RAD51CO43502 376 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 CARSP49589 748 aaKnown RBP17.6■□□□□ 0.41
OTUB1-204ENST00000447683 GUCY2DQ02846 1103 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 PAK2Q13177 524 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 TCEAL1Q15170 157 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 SWSAP1Q6NVH7 229 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 SLC39A4Q6P5W5 647 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 TMC2Q8TDI7 906 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 SLC20A1Q8WUM9 679 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 ARHGEF26Q96DR7 871 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 ISCUQ9H1K1 167 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 SLC9A2Q9UBY0 812 aa17.6■□□□□ 0.41
OTUB1-204ENST00000447683 PTPRFP10586 1907 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ERICH4A6NGS2 130 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 DGAT1O75907 488 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ABCB4P21439 1286 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ABHD15Q6UXT9 468 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 FAM71AQ8IYT1 594 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 MCPH1Q8NEM0 835 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 MFSD14AQ96MC6 490 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 THAP2Q9H0W7 228 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 XPNPEP1Q9NQW7 623 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 GPRC5DQ9NZD1 345 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 TTC7AQ9ULT0 858 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ZSCAN5CA6NGD5 496 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 BHMG1C9JSJ3 638 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 CCDC188H7C350 402 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ACTR2P61160 394 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ENPEPQ07075 957 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 PTPROQ16827 1216 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 CCDC60Q8IWA6 550 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 EIF1ADQ8N9N8 165 aaKnown RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 CASKIN2Q8WXE0 1202 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 RIN2Q8WYP3 895 aaPredicted RBP17.59■□□□□ 0.41
OTUB1-204ENST00000447683 SAAL1Q96ER3 474 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 TMEM8AQ9HCN3 771 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 GGA3Q9NZ52 723 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
OTUB1-204ENST00000447683 ADGRA3Q8IWK6 1321 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 LMAN1P49257 510 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 GNPTABQ3T906 1256 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 ALS2CLQ60I27 953 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 KRT39Q6A163 491 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 RHOT2Q8IXI1 618 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 TSEN2Q8NCE0 465 aaKnown RBP17.58■□□□□ 0.41
OTUB1-204ENST00000447683 SEMA4DQ92854 862 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 KAT5Q92993 513 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 KREMEN1Q96MU8 473 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 SH3GL2Q99962 352 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 DONSONQ9NYP3 566 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 NFU1Q9UMS0 254 aa17.58■□□□□ 0.41
OTUB1-204ENST00000447683 DIS3Q9Y2L1 958 aaKnown RBP17.58■□□□□ 0.41
OTUB1-204ENST00000447683 ZNFX1Q9P2E3 1918 aaKnown RBP17.58■□□□□ 0.4
OTUB1-204ENST00000447683 DDX3YO15523 660 aaKnown RBP17.58■□□□□ 0.4
OTUB1-204ENST00000447683 GTF2H1P32780 548 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 GPC3P51654 580 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 SOX10P56693 466 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 KLHL7Q8IXQ5 586 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.58■□□□□ 0.4
OTUB1-204ENST00000447683 SHC3Q92529 594 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 CYP26B1Q9NR63 512 aa17.58■□□□□ 0.4
OTUB1-204ENST00000447683 SEPT11Q9NVA2 429 aaKnown RBP17.58■□□□□ 0.4
OTUB1-204ENST00000447683 PRKCEQ02156 737 aa17.57■□□□□ 0.4
OTUB1-204ENST00000447683 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
OTUB1-204ENST00000447683 BRDTQ58F21 947 aaPredicted RBP17.57■□□□□ 0.4
OTUB1-204ENST00000447683 EGFL6Q8IUX8 553 aa17.57■□□□□ 0.4
OTUB1-204ENST00000447683 RPUSD2Q8IZ73 545 aaKnown RBP17.57■□□□□ 0.4
OTUB1-204ENST00000447683 MREGQ8N565 214 aa17.57■□□□□ 0.4
OTUB1-204ENST00000447683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■■■□ 24.1
OTUB1-204ENST00000447683 EPS8L1Q8TE68 723 aa17.57■□□□□ 0.4
OTUB1-204ENST00000447683 ARHGAP28Q9P2N2 729 aa17.57■□□□□ 0.4
OTUB1-204ENST00000447683 NOCTQ9UK39 431 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms