RNA–Protein interactions for RNA: ENST00000447368.6

UBP1-204, Transcript of upstream binding protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBP1, Length 3,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-204ENST00000447368 HOXD13P35453 343 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 CRKP46108 304 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
UBP1-204ENST00000447368 AP3B2Q13367 1082 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 TRIM74Q86UV6 250 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 TRIM73Q86UV7 250 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
UBP1-204ENST00000447368 TBK1Q9UHD2 729 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 INTUQ9ULD6 942 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 DDTLA6NHG4 134 aaPredicted RBP13.61□□□□□ -0.23
UBP1-204ENST00000447368 TISP43B9A030 160 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 SMNDC1O75940 238 aaKnown RBP eCLIP13.61□□□□□ -0.236e-11■■■■□ 20.7
UBP1-204ENST00000447368 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
UBP1-204ENST00000447368 EYA4O95677 639 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 KRT16P08779 473 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 SNHG28P0DPA3 235 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 RFC5P40937 340 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 MARCKSL1P49006 195 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 IFI35P80217 286 aaPredicted RBP13.61□□□□□ -0.23
UBP1-204ENST00000447368 GABPAQ06546 454 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 KIAA1755Q5JYT7 1200 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 SEMA4AQ9H3S1 761 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
UBP1-204ENST00000447368 RBM26Q5T8P6 1007 aaKnown RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 KRT35Q92764 455 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 FAM20AQ96MK3 541 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 UBAP1LF5GYI3 381 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 FOSP01100 380 aaPredicted RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 KRT5P13647 590 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 GBP1P32455 592 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 RNF220Q5VTB9 566 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 MAB21L3Q8N8X9 362 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 EPS8L3Q8TE67 593 aaKnown RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 KDM4CQ9H3R0 1056 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 GAKO14976 1311 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 GAP43P17677 238 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 POLD1P28340 1107 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 ALG3Q92685 438 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 P2RX7Q99572 595 aaKnown RBP13.6□□□□□ -0.23
UBP1-204ENST00000447368 ZNF577Q9BSK1 485 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
UBP1-204ENST00000447368 TCP11X1B4DZS4 312 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 RASGRF2O14827 1237 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 TGFB1I1O43294 461 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 DNAJC8O75937 253 aaPredicted RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 ECHS1P30084 290 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 AGBL2Q5U5Z8 902 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 TDRD3Q9H7E2 651 aaKnown RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 HOMER2Q9NSB8 354 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 RHBDL2Q9NX52 303 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 PI4KBQ9UBF8 816 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 APEX2Q9UBZ4 518 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 MYH1P12882 1939 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 CCND1P24385 295 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 PRKCIP41743 596 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 HYIQ5T013 277 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.59□□□□□ -0.23
UBP1-204ENST00000447368 ARHGEF2Q92974 986 aaKnown RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 TMEM59LQ9UK28 342 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 EIF3BP55884 814 aaKnown RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 SP4Q02446 784 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 CUL3Q13618 768 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 PDCD2Q16342 344 aaPredicted RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 GBP5Q96PP8 586 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 AGPAT1Q99943 283 aa13.59□□□□□ -0.23
UBP1-204ENST00000447368 CORO1CQ9ULV4 474 aaPredicted RBP13.59□□□□□ -0.23
UBP1-204ENST00000447368 COMTP21964 271 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 MSH2P43246 934 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 LONRF1Q17RB8 773 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 EAPPQ56P03 285 aaPredicted RBP13.58□□□□□ -0.24
UBP1-204ENST00000447368 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
UBP1-204ENST00000447368 CAPN12Q6ZSI9 719 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 INTS8Q75QN2 995 aaKnown RBP13.58□□□□□ -0.24
UBP1-204ENST00000447368 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
UBP1-204ENST00000447368 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
UBP1-204ENST00000447368 PPFIA2O75334 1257 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms