RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 C17orf75Q9HAS0 396 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 PARVGQ9HBI0 331 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
RFC4-208ENST00000447345 ARHGAP28Q9P2N2 729 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 ANK1P16157 1881 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 REV3LO60673 3130 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 A0A1B0GVL5 298 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 N4BP3O15049 544 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 EOMESO95936 686 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
RFC4-208ENST00000447345 ITGA4P13612 1032 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 IDEP14735 1019 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 PFKFB1P16118 471 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 AKAP5P24588 427 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 PBX3P40426 434 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 MLH1P40692 756 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 STRN3Q13033 797 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 ATF7IP2Q5U623 682 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 SPIRE2Q8WWL2 714 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
RFC4-208ENST00000447345 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
RFC4-208ENST00000447345 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
RFC4-208ENST00000447345 TBC1D7Q9P0N9 293 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 MYO7AQ13402 2215 aa13.11□□□□□ -0.31
RFC4-208ENST00000447345 TRAK2O60296 914 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 ZNF623O75123 536 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
RFC4-208ENST00000447345 NMT1P30419 496 aaKnown RBP13.1□□□□□ -0.31
RFC4-208ENST00000447345 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
RFC4-208ENST00000447345 ZNF131P52739 623 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 GPM6BQ13491 265 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 ZNF568Q3ZCX4 644 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 ZBTB33Q86T24 672 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 IQUBQ8NA54 791 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 URGCPQ8TCY9 931 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
RFC4-208ENST00000447345 BICD1Q96G01 975 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
RFC4-208ENST00000447345 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
RFC4-208ENST00000447345 LPXNO60711 386 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFC4-208ENST00000447345 OFD1O75665 1012 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 SLC34A2O95436 690 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 POMCP01189 267 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 CASP1P29466 404 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 BMPR1AP36894 532 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 MATR3P43243 847 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFC4-208ENST00000447345 AFMP43652 599 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ASIC1P78348 528 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 NOMO2Q5JPE7 1267 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 GAD1Q99259 594 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 MRPL9Q9BYD2 267 aaKnown RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 BLZF1Q9H2G9 400 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 CWH43Q9H720 699 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 ALG13Q9NP73 1137 aaKnown RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
RFC4-208ENST00000447345 GDAQ9Y2T3 454 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 COL6A3P12111 3177 aa13.09□□□□□ -0.31
RFC4-208ENST00000447345 H0YCG3 227 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms