RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NEUROG3Q9Y4Z2 214 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 KCNMB2Q9Y691 235 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 CELSR3Q9NYQ7 3312 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 MYO9AB2RTY4 2548 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 IGKV6D-41A0A0C4DH26 115 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 KANSL1LA0AUZ9 987 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 GIPC1O14908 333 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 ARHGAP6O43182 974 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 CLASP2O75122 1294 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 XYLBO75191 536 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 IDH1O75874 414 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 CHRNA1P02708 482 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 PRB1P04280 392 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 GATMP50440 423 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 NRLP54845 237 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 ATP8B2P98198 1209 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 ZNF252P-AS1Q0IIN9 211 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 TROAPQ12815 778 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 LPIN1Q14693 890 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 NONOQ15233 471 aaKnown RBP eCLIP3.87□□□□□ -1.79
PMS1-215ENST00000447232 LY6KQ17RY6 165 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 SWI5Q1ZZU3 235 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 GPR149Q86SP6 731 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 RTN4RL1Q86UN2 441 aaPredicted RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 CMTR1Q8N1G2 835 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 GMCL1P1Q8NEA9 526 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 PPTC7Q8NI37 304 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 CLDN23Q96B33 292 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 MYL10Q9BUA6 226 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 CRNKL1Q9BZJ0 848 aaKnown RBP3.87□□□□□ -1.79
PMS1-215ENST00000447232 SAP130Q9H0E3 1048 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 EPS15L1Q9UBC2 864 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 LAMA1P25391 3075 aa3.87□□□□□ -1.79
PMS1-215ENST00000447232 C17orf102A2RUQ5 167 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 C2orf71A6NGG8 1288 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 NFIBO00712 420 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 PLA2G6O60733 806 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 DEAF1O75398 565 aaPredicted RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 GHRP10912 638 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 NOVA1P51513 510 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 STAT2P52630 851 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 ADAM17P78536 824 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 MGAT3Q09327 533 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 AASDHQ4L235 1098 aaPredicted RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 TTC39AQ5SRH9 613 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 SLC30A10Q6XR72 485 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 ETFBKMTQ8IXQ9 262 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 THNSL1Q8IYQ7 743 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 MRPL43Q8N983 215 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 COLGALT1Q8NBJ5 622 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 DNERQ8NFT8 737 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 SHDQ96IW2 340 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 C16orf70Q9BSU1 422 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 SMG9Q9H0W8 520 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 ENTPD7Q9NQZ7 604 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 MSRB2Q9Y3D2 182 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 PTPRCP08575 1304 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 FRMPD2Q68DX3 1309 aaPredicted RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 NRCAMQ92823 1304 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 TMEM232C9JQI7 657 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 J3QW42 95 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 PRMT3O60678 531 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 MMP20O60882 483 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 UBTFL1P0CB47 393 aaPredicted RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 BMP3P12645 472 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 RPS9P46781 194 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 MTX1Q13505 466 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 ELOAQ14241 798 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 SF3A2Q15428 464 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 PTPN14Q15678 1187 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 CCDC158Q5M9N0 1113 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 CHST3Q7LGC8 479 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 FAM160B2Q86V87 743 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 WFDC8Q8IUA0 241 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 STAG1Q8WVM7 1258 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 TP53INP1Q96A56 240 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 DBNDD2Q9BQY9 259 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 CCDC8Q9H0W5 538 aaPredicted RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 RNPEPQ9H4A4 650 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 CWH43Q9H720 699 aa3.86□□□□□ -1.79
PMS1-215ENST00000447232 DDX41Q9UJV9 622 aaKnown RBP3.86□□□□□ -1.79
PMS1-215ENST00000447232 FAM221BA6H8Z2 402 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ANHXE9PGG2 379 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 PPFIA4O75335 1185 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ICAM1P05362 532 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 ZNF806P0C7X5 589 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 STAG3L1P0CL83 205 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SMIM10L2AP0DMW4 78 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SMIM10L2BP0DMW5 78 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 FZD5Q13467 585 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 FBXO47Q5MNV8 452 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 IGF2-ASQ6U949 168 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 TMC5Q6UXY8 1006 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 CAPN12Q6ZSI9 719 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 LCORLQ8N3X6 602 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 SLC22A17Q8WUG5 538 aa3.85□□□□□ -1.79
PMS1-215ENST00000447232 CHURC1Q8WUH1 139 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms