RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KIF20AO95235 890 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 PIGRP01833 764 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 CXCL10P02778 98 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 PMS1P54277 932 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 PLEKHG4Q58EX7 1191 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 ZBTB33Q86T24 672 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 TMEM199Q8N511 208 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 GBP3Q9H0R5 595 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 PDZD7Q9H5P4 517 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 CEP290O15078 2479 aa19.71■□□□□ 0.75
TRAPPC4-203ENST00000447216 PSMA7O14818 248 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 PARNO95453 639 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 HARSP12081 509 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 RFC2P35250 354 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 MATR3P43243 847 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 PCBP1Q15365 356 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 ANO6Q4KMQ2 910 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZPBP2Q6X784 338 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 SEPT8Q92599 483 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 P2RX5Q93086 422 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 DHTKD1Q96HY7 919 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 HAPLN2Q9GZV7 340 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 TYW1Q9NV66 732 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 TNFSF13BQ9Y275 285 aa19.7■□□□□ 0.74
TRAPPC4-203ENST00000447216 ANK1P16157 1881 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 ABLIM1O14639 778 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 N4BP3O15049 544 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 NPTXRO95502 500 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 ACRP10323 421 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 CCNE1P24864 410 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 AXLP30530 894 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 PPP1R2P41236 205 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 NCBP1Q09161 790 aaKnown RBP19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 PAK1Q13153 545 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 DSC3Q14574 896 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 ANKRD40Q6AI12 368 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 CENPPQ6IPU0 288 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 NOTUMQ6P988 496 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 LINC01599Q8WXQ3 324 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 CBWD1Q9BRT8 395 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 TCHPQ9BT92 498 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 EIF2AQ9BY44 585 aaKnown RBP19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 PCIF1Q9H4Z3 704 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 AGPAT3Q9NRZ7 376 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 DACH1Q9UI36 760 aa19.69■□□□□ 0.74
TRAPPC4-203ENST00000447216 A0A1B0GUA9 196 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 PDXKO00764 312 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 TOM1L1O75674 476 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 IBSPP21815 317 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 PROZP22891 400 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ADSSP30520 456 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZNF568Q3ZCX4 644 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZCWPW2Q504Y3 356 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 UBXN11Q5T124 520 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 TWF2Q6IBS0 349 aaKnown RBP19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ARMCX5Q6P1M9 558 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 MPZL3Q6UWV2 235 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 HS2ST1Q7LGA3 356 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 RTN4RL1Q86UN2 441 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZSWIM2Q8NEG5 633 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 MED15Q96RN5 788 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 ADAM2Q99965 735 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 CDT1Q9H211 546 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 PTPRHQ9HD43 1115 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 PTPRSQ13332 1948 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 TTC3P53804 2025 aa19.68■□□□□ 0.74
TRAPPC4-203ENST00000447216 CALUO43852 315 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 CYP2J2P51589 502 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 FPGSQ05932 587 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 PPIGQ13427 754 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 NOLC1Q14978 699 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 SLC27A1Q6PCB7 646 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 LRSAM1Q6UWE0 723 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 POMGNT1Q8WZA1 660 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 TSG101Q99816 390 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 DUSP9Q99956 384 aaKnown RBP19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 IL23AQ9NPF7 189 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 TRAF3IP3Q9Y228 551 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 NR2E3Q9Y5X4 410 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 PDE4DIPQ5VU43 2346 aa19.67■□□□□ 0.74
TRAPPC4-203ENST00000447216 CLDN3O15551 220 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZSCAN20P17040 1043 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 EPHB4P54760 987 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 ZNF445P59923 1031 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 MCL1Q07820 350 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 TTI2Q6NXR4 508 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 CNKSR3Q6P9H4 555 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 NOC3LQ8WTT2 800 aaKnown RBP19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 APBB2Q92870 758 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 SAAL1Q96ER3 474 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 CCDC51Q96ER9 411 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 EEF2KMTQ96G04 330 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 ADPGKQ9BRR6 497 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 MSTO1Q9BUK6 570 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 TSPY26PQ9H489 355 aa19.66■□□□□ 0.74
TRAPPC4-203ENST00000447216 CHST12Q9NRB3 414 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms