RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 DEPTORQ8TB45 409 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CAGE1Q8TC20 777 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NEK9Q8TD19 979 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 DQX1Q8TE96 717 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 AGAP11Q8TF27 550 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ATP8B4Q8TF62 1192 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 WDR60Q8WVS4 1066 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 RUFY2Q8WXA3 655 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 MRPS27Q92552 414 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 RELTQ969Z4 430 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CENPTQ96BT3 561 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SYTL4Q96C24 671 aaPredicted RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 LRRC45Q96CN5 670 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 HAUS1Q96CS2 278 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ABHD8Q96I13 439 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 HIC2Q96JB3 615 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CDK5RAP3Q96JB5 506 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 PGBD1Q96JS3 809 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ATP6V1G3Q96LB4 118 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 RNPC3Q96LT9 517 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NR1H4Q96RI1 486 aaPredicted RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 TUBGCP5Q96RT8 1024 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SDF4Q9BRK5 362 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 LLPHQ9BRT6 129 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CENPKQ9BS16 269 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 OSBPL10Q9BXB5 764 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 KRT23Q9C075 422 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NIF3L1Q9GZT8 377 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NSRP1Q9H0G5 558 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CARD9Q9H257 536 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 TUT1Q9H6E5 874 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SYNCQ9H7C4 482 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ZSWIM4Q9H7M6 989 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 FBRSQ9HAH7 460 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 PARVBQ9HBI1 364 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 KCNMB3Q9NPA1 279 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 PRDM5Q9NQX1 630 aaPredicted RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ATP8A2Q9NTI2 1148 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NLRP2Q9NX02 1062 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 CACNA2D2Q9NY47 1150 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 HOXC10Q9NYD6 342 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SLAMF8Q9P0V8 285 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SAP30BPQ9UHR5 308 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SSX2IPQ9Y2D8 614 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 LRCH1Q9Y2L9 728 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 LUC7L2Q9Y383 392 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 RRP7AQ9Y3A4 280 aaKnown RBP3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 L3MBTL1Q9Y468 752 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 FADS3Q9Y5Q0 445 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SNX14Q9Y5W7 946 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 NR2E3Q9Y5X4 410 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 ST14Q9Y5Y6 855 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 MYPNQ86TC9 1320 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 WDR17Q8IZU2 1322 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 SBNO2Q9Y2G9 1366 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 PTPRTO14522 1441 aa3.1□□□□□ -1.91
RPL39P40-201ENST00000445481 A2MP01023 1474 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ABCC3O15438 1527 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PBRM1Q86U86 1689 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 SMIM31A0A1B0GVY4 71 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 BICDL2A1A5D9 508 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 TRIM43BA6NCK2 446 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 IQCA1LA6NCM1 817 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 UNCXA6NJT0 531 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 FAM155AB1AL88 458 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 SPECC1L-ADORA2AF8WAN1 911 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 EIF3FO00303 357 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 MATN2O00339 956 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 CETN3O15182 167 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ORC4O43929 436 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ICMTO60725 284 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 CBFA2T3O75081 653 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 TBCAO75347 108 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 STAM2O75886 525 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ALDH1L1O75891 902 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ATP5HO75947 161 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 GFPT2O94808 682 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PARNO95453 639 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ASLP04424 464 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 SLC3A2P08195 630 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PDGFRBP09619 1106 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 U2AF1L5P0DN76 240 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PRLRP16471 622 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ZKSCAN1P17029 563 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 BMP7P18075 431 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 GLDCP23378 1020 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 HOXD10P28358 340 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 TMPOP42166 694 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 CLCN2P51788 898 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 CSE1LP55060 971 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 GEMIN4P57678 1058 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 BPIFB4P59827 614 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 U2AF1Q01081 240 aaKnown RBP eCLIP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PDE4BQ07343 736 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 PPIDQ08752 370 aaKnown RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 RESTQ13127 1097 aa3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 ITGB3BPQ13352 177 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 CYLC2Q14093 348 aaPredicted RBP3.09□□□□□ -1.91
RPL39P40-201ENST00000445481 TRIM14Q14142 442 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms