RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
HMGN1-208ENST00000443046 PHKBQ93100 1093 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 NLRP4Q96MN2 994 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 FAM193BQ96PV7 902 aaPredicted RBP16.14■□□□□ 0.17
HMGN1-208ENST00000443046 NT5C3AQ9H0P0 336 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 ARHGEF3Q9NR81 526 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 COL4A3BPQ9Y5P4 624 aa16.14■□□□□ 0.17
HMGN1-208ENST00000443046 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
HMGN1-208ENST00000443046 KRT32Q14532 448 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 CCDC148Q8NFR7 591 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 PRPF31Q8WWY3 499 aaKnown RBP16.13■□□□□ 0.17
HMGN1-208ENST00000443046 RNF26Q9BY78 433 aaPredicted RBP16.13■□□□□ 0.17
HMGN1-208ENST00000443046 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
HMGN1-208ENST00000443046 ARL5CA6NH57 179 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 POTEMA6NI47 508 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 TGM5O43548 720 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 SPATA31D3P0C874 917 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 RFX1P22670 979 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 PSMC5P62195 406 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 PLA2G4FQ68DD2 849 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 DCLRE1AQ6PJP8 1040 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 SPATA31D4Q6ZUB0 917 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
HMGN1-208ENST00000443046 CNNM3Q8NE01 707 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 PJA1Q8NG27 643 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 TBCKQ8TEA7 893 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 DDX23Q9BUQ8 820 aaKnown RBP16.12■□□□□ 0.17
HMGN1-208ENST00000443046 PRKD2Q9BZL6 878 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 DHX33Q9H6R0 707 aaKnown RBP16.12■□□□□ 0.17
HMGN1-208ENST00000443046 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 MIOSQ9NXC5 875 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
HMGN1-208ENST00000443046 PRG3Q9Y2Y8 225 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-208ENST00000443046 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
HMGN1-208ENST00000443046 MIA3Q5JRA6 1907 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 F8W810 466 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 M0R2N6 131 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 EML1O00423 815 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
HMGN1-208ENST00000443046 TDP2O95551 362 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 MYBP10242 640 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 IFNAR1P17181 557 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 OR1G1P47890 313 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 NPEPPSP55786 919 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 LAMTOR4Q0VGL1 99 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 ZNF528Q3MIS6 628 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 Q6ZUG5 572 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 KCNB2Q92953 911 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 FNIP2Q9P278 1114 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 PPME1Q9Y570 386 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 IPPQ9Y573 584 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 ZFP37Q9Y6Q3 630 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-208ENST00000443046 NUMBLQ9Y6R0 609 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
HMGN1-208ENST00000443046 PATJQ8NI35 1801 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 LRRN2O75325 713 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 ITGA4P13612 1032 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 CPA1P15085 419 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 PALB2Q86YC2 1186 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 EXOC8Q8IYI6 725 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 GSTCDQ8NEC7 633 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 SLC7A3Q8WY07 619 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 BRF1Q92994 677 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 GAD1Q99259 594 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 RPP25Q9BUL9 199 aaKnown RBP16.1■□□□□ 0.17
HMGN1-208ENST00000443046 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 GPR62Q9BZJ7 368 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 FOXQ1Q9C009 403 aa16.1■□□□□ 0.17
HMGN1-208ENST00000443046 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.1■□□□□ 0.17
HMGN1-208ENST00000443046 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-208ENST00000443046 ZMYND10O75800 440 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 QARSP47897 775 aaKnown RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 GPC5P78333 572 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 RSPO4Q2I0M5 234 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 GET4Q7L5D6 327 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 PSPC1Q8WXF1 523 aaKnown RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 FGF14Q92915 247 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 SLC26A6Q9BXS9 759 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 EIF2AQ9BY44 585 aaKnown RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 PIDD1Q9HB75 910 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 WRAP73Q9P2S5 460 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-208ENST00000443046 FBXO4Q9UKT5 387 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 VAV3Q9UKW4 847 aa16.09■□□□□ 0.17
HMGN1-208ENST00000443046 PCDHA4Q9UN74 947 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms