RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TBC1D13Q9NVG8 400 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 PRKAG3Q9UGI9 489 aa9.71□□□□□ -0.86
USP6NL-203ENST00000443016 LRRIQ4A6NIV6 560 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 MBTPS2O43462 519 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 MED24O75448 989 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 TCF3P15923 654 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 SYT1P21579 422 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 HOXA11P31270 313 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 SMAD2Q15796 467 aaKnown RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 NOTUMQ6P988 496 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 SLC39A11Q8N1S5 342 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 MCPH1Q8NEM0 835 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 POLR3FQ9H1D9 316 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 KIAA1671Q9BY89 1806 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 ARHGEF35A5YM69 484 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 OFD1O75665 1012 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 SPATA31C1P0DKV0 1188 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 ITGA4P13612 1032 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 RPA1P27694 616 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 RBM10P98175 930 aaKnown RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 CAPSQ13938 189 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 ADHFE1Q8IWW8 467 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 HACE1Q8IYU2 909 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 VPS52Q8N1B4 723 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 CNNM3Q8NE01 707 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 CPB2Q96IY4 423 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 PCMTD1Q96MG8 357 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 POLR3CQ9BUI4 534 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-203ENST00000443016 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 CLEC1BQ9P126 229 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 LRWD1Q9UFC0 647 aa9.7□□□□□ -0.86
USP6NL-203ENST00000443016 TSPAN1O60635 241 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 POMCP01189 267 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 ALADP13716 330 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 COL9A1P20849 921 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 GLRA2P23416 452 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 U2AF2P26368 475 aaKnown RBP eCLIP9.69□□□□□ -0.86
USP6NL-203ENST00000443016 AXLP30530 894 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 DDIT3P35638 169 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 ARL2P36404 184 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 CCT6AP40227 531 aaKnown RBP9.69□□□□□ -0.86
USP6NL-203ENST00000443016 ZP2Q05996 745 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
USP6NL-203ENST00000443016 DUSP6Q16828 381 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 AGMOQ6ZNB7 445 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.862e-7■■□□□ 14.2
USP6NL-203ENST00000443016 MSLNLQ96KJ4 702 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 APOL6Q9BWW8 343 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 NRDE2Q9H7Z3 1164 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 GPRC5CQ9NQ84 441 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 ATP6V1DQ9Y5K8 247 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 CNTNAP2Q9UHC6 1331 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 PLXNA4Q9HCM2 1894 aa9.69□□□□□ -0.86
USP6NL-203ENST00000443016 CXCL14O95715 111 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 GLP2RO95838 553 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ALDH2P05091 517 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 MBTD1Q05BQ5 628 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 POU5F1BQ06416 359 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 COASYQ13057 564 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 PTGDRQ13258 359 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 TMEM31Q5JXX7 168 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 PADI6Q6TGC4 694 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ZBTB8OSQ8IWT0 167 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 MRPL43Q8N983 215 aaKnown RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 CCDC51Q96ER9 411 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 EIF2AQ9BY44 585 aaKnown RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 DNAJB4Q9UDY4 337 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 DBR1Q9UK59 544 aaKnown RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 HES2Q9Y543 173 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 IPPQ9Y573 584 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 FSCN2O14926 492 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 EYA4O95677 639 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 GALTP07902 379 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ZNF16P17020 682 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ARF4P18085 180 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 LIG1P18858 919 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 NCLP19338 710 aaKnown RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 AMHR2Q16671 573 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 MRPL10Q7Z7H8 261 aaKnown RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 TMEM173Q86WV6 379 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 CDR2LQ86X02 465 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 ZNF280BQ86YH2 543 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 APOL5Q9BWW9 433 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 NFKBIZQ9BYH8 718 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 CSRNP2Q9H175 543 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 FAN1Q9Y2M0 1017 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 USP15Q9Y4E8 981 aaPredicted RBP9.68□□□□□ -0.86
USP6NL-203ENST00000443016 PCDHB6Q9Y5E3 794 aa9.68□□□□□ -0.86
USP6NL-203ENST00000443016 WDFY4Q6ZS81 3184 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms