RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZBED2Q9BTP6 218 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 TARS2Q9BW92 718 aaKnown RBP17.63■□□□□ 0.41
USP39-205ENST00000442708 NKX2-4Q9H2Z4 354 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 TMEM161AQ9NX61 479 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 PCDHB2Q9Y5E7 798 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 KIAA1671Q9BY89 1806 aa17.63■□□□□ 0.41
USP39-205ENST00000442708 DLL1O00548 723 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 ABLIM1O14639 778 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 PPP1R37O75864 691 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 NPTXRO95502 500 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 CA3P07451 260 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 MYBP10242 640 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 GTF2BQ00403 316 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 ATF7IP2Q5U623 682 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 SLC27A1Q6PCB7 646 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 MRPL10Q7Z7H8 261 aaKnown RBP17.62■□□□□ 0.41
USP39-205ENST00000442708 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 RNF169Q8NCN4 708 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 ST6GALNAC4Q9H4F1 302 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
USP39-205ENST00000442708 OLFML3Q9NRN5 406 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 SEL1LQ9UBV2 794 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 TBX20Q9UMR3 447 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 HES2Q9Y543 173 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 PCDHB7Q9Y5E2 793 aa17.62■□□□□ 0.41
USP39-205ENST00000442708 GTPBP6O43824 516 aaPredicted RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 ZNF623O75123 536 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 KCNA1Q09470 495 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 CLLU1OSQ5K130 101 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 CCDC51Q96ER9 411 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 ZBTB45Q96K62 511 aaPredicted RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 MRPL4Q9BYD3 311 aaKnown RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 NXF3Q9H4D5 531 aaKnown RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
USP39-205ENST00000442708 PTPRHQ9HD43 1115 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 KCNG1Q9UIX4 513 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 LRFN2Q9ULH4 789 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 IPPQ9Y573 584 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 INSL6Q9Y581 213 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 NLRC5Q86WI3 1866 aa17.61■□□□□ 0.41
USP39-205ENST00000442708 H0YCG3 227 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 N4BP3O15049 544 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 EOMESO95936 686 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 PROZP22891 400 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 UBE2HP62256 183 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 DPYDQ12882 1025 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 STRN3Q13033 797 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 RAB30Q15771 203 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 SLC39A4Q6P5W5 647 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 AGMOQ6ZNB7 445 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 TIFAQ96CG3 184 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 CASD1Q96PB1 797 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 HAPLN2Q9GZV7 340 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 LMBRD1Q9NUN5 540 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 HCSTQ9UBK5 93 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 MSRAQ9UJ68 235 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 TNFSF13BQ9Y275 285 aa17.6■□□□□ 0.41
USP39-205ENST00000442708 PVALEFA0A1B0GWK0 134 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 LINC01553A4QN01 128 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 TISP43B9A030 160 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 GCNT3O95395 438 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 LINC00271P0C7V0 271 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 RAB27AP51159 221 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 AFF1P51825 1210 aaKnown RBP17.59■□□□□ 0.41
USP39-205ENST00000442708 TAP1Q03518 808 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 TMEM132AQ24JP5 1023 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 KMT5BQ4FZB7 885 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 PAN2Q504Q3 1202 aaKnown RBP17.59■□□□□ 0.41
USP39-205ENST00000442708 MAP4K3Q8IVH8 894 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 HELQQ8TDG4 1101 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 ERCC4Q92889 916 aaPredicted RBP17.59■□□□□ 0.41
USP39-205ENST00000442708 CDT1Q9H211 546 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
USP39-205ENST00000442708 TRIP11Q15643 1979 aa17.59■□□□□ 0.41
USP39-205ENST00000442708 COL6A3P12111 3177 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 TBKBP1A7MCY6 615 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 ANKRD63C9JTQ0 380 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 PIGRP01833 764 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 SKIP12755 728 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 HOXD13P35453 343 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 PNOCQ13519 176 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 FAM26FQ5R3K3 315 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
USP39-205ENST00000442708 ZPBP2Q6X784 338 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 LRRC55Q6ZSA7 311 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
USP39-205ENST00000442708 ZBTB33Q86T24 672 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 CEP120Q8N960 986 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 APOL6Q9BWW8 343 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 CXCL16Q9H2A7 254 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 TRANK1O15050 2925 aa17.58■□□□□ 0.4
USP39-205ENST00000442708 RALGAPA2Q2PPJ7 1873 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms