RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 NOMO2Q5JPE7 1267 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 CES5AQ6NT32 575 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 VPS52Q8N1B4 723 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 AUTS2Q8WXX7 1259 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 SLC7A3Q8WY07 619 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 TMEM143Q96AN5 459 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 PGBD4Q96DM1 585 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 PHF20Q9BVI0 1012 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 VAV3Q9UKW4 847 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 COL4A3BPQ9Y5P4 624 aa10.25□□□□□ -0.77
AC011228.1-201ENST00000439027 ZFHX2Q9C0A1 2572 aaPredicted RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 BTBD18B2RXH4 712 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 OFD1O75665 1012 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 BAG4O95429 457 aaKnown RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 KRT2P35908 639 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 RAB27AP51159 221 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 LAMTOR4Q0VGL1 99 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 RESTQ13127 1097 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 KCNC3Q14003 757 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 EPHA7Q15375 998 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 XKR9Q5GH70 373 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 SUGP1Q8IWZ8 645 aaKnown RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 DIS3L2Q8IYB7 885 aaKnown RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 EXOC8Q8IYI6 725 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 URGCPQ8TCY9 931 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 PRPF31Q8WWY3 499 aaKnown RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 PSPC1Q8WXF1 523 aaKnown RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 LXNQ9BS40 222 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 KCNH6Q9H252 994 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 ZSCAN16Q9H4T2 348 aaPredicted RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 NRDE2Q9H7Z3 1164 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 KCNMB3Q9NPA1 279 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 FAM105AQ9NUU6 356 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 TBC1D13Q9NVG8 400 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 WDR70Q9NW82 654 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 RGL1Q9NZL6 768 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 CDH22Q9UJ99 828 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 HCFC2Q9Y5Z7 792 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 PTPRZ1P23471 2315 aaPredicted RBP10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 MYO10Q9HD67 2058 aa10.24□□□□□ -0.77
AC011228.1-201ENST00000439027 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 MEIS3P2A8K0S8 358 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 TK2O00142 265 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ZNF623O75123 536 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 GALTP07902 379 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 WEE2P0C1S8 567 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 YWHABP31946 246 aaKnown RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 RFC5P40937 340 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 SLC11A1P49279 550 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 NHLH1Q02575 133 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 CYP4A11Q02928 519 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 SIGLEC14Q08ET2 396 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 NR5A1Q13285 461 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 CTTNQ14247 550 aaKnown RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 RARS2Q5T160 578 aaKnown RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 BMP8AQ7Z5Y6 402 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 SRGAP1Q7Z6B7 1085 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 DDX53Q86TM3 631 aaKnown RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 TMEM173Q86WV6 379 aaPredicted RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 C12orf76Q8N812 135 aaPredicted RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 HAS1Q92839 578 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 IGSF21Q96ID5 467 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 FAM193BQ96PV7 902 aaPredicted RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 TRAIPQ9BWF2 469 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ADAM7Q9H2U9 754 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 FOXP1Q9H334 677 aaPredicted RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ZSWIM4Q9H7M6 989 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 IFT122Q9HBG6 1241 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 WRAP73Q9P2S5 460 aaPredicted RBP10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 NR2E1Q9Y466 385 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ATP6V1DQ9Y5K8 247 aa10.23□□□□□ -0.77
AC011228.1-201ENST00000439027 ZBTB39O15060 712 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 TBX3O15119 743 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ASAP2O43150 1006 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 SSBP05455 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 CTSAP10619 480 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 EPCAMP16422 314 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 U2AF2P26368 475 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 MTHFRP42898 656 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 MRE11P49959 708 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 ITIH3Q06033 890 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 EMC2Q15006 297 aa10.22□□□□□ -0.77
AC011228.1-201ENST00000439027 E2F4Q16254 413 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms