RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MRPL49Q13405 166 aaKnown RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 UBE3CQ15386 1083 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 FSCN1Q16658 493 aaKnown RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 CT83Q5H943 113 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 RNF187Q5TA31 235 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 APBB1IPQ7Z5R6 666 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 ELOA2Q8IYF1 753 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 MSL3Q8N5Y2 521 aaKnown RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 UBR7Q8N806 425 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 PLEKHG4BQ96PX9 1271 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 ORAI2Q96SN7 254 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 MNTQ99583 582 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 SRRDQ9UH36 339 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 APOBEC2Q9Y235 224 aaKnown RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 HS3ST3A1Q9Y663 406 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 SYNJ1O43426 1573 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 GRXCR1A8MXD5 290 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CFBP00751 764 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 LTA4HP09960 611 aaKnown RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CANXP27824 592 aaKnown RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CNGA1P29973 690 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 SOX5P35711 763 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 MAN2A2P49641 1150 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 NRG3P56975 720 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 SLC25A3Q00325 362 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 MEF2AQ02078 507 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 STRN3Q13033 797 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 TUBA3CQ13748 450 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 TOB2Q14106 344 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 DCAF17Q5H9S7 520 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 TUBA3EQ6PEY2 450 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 USP51Q70EK9 711 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 GLB1L2Q8IW92 636 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 LILRA3Q8N6C8 439 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 AMER2Q8N7J2 671 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CHAC2Q8WUX2 184 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 LMBR1Q8WVP7 490 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 ST8SIA2Q92186 375 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 EAF2Q96CJ1 260 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 ACAP3Q96P50 834 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 ZNF341Q9BYN7 854 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 TMX1Q9H3N1 280 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 TRPS1Q9UHF7 1281 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CDY2AQ9Y6F7 541 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 CLASP1Q7Z460 1538 aa4.61□□□□□ -1.67
HMGB3P12-201ENST00000438745 GOLGA6L6A8MZA4 724 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 DNAJC6O75061 913 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 TMEM127O75204 238 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 LPLP06858 475 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 POU3F3P20264 500 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 CASRP41180 1078 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 LGALS4P56470 323 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 PPARAQ07869 468 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 MGAT5Q09328 741 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 FAPQ12884 760 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 UGT8Q16880 541 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 CCDC62Q6P9F0 684 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 LMBR1LQ6UX01 489 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 ABHD15Q6UXT9 468 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 DOK3Q7L591 496 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 GPRIN1Q7Z2K8 1008 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 ZFPM1Q8IX07 1006 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 SNX33Q8WV41 574 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 ATXN2LQ8WWM7 1075 aaKnown RBP4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 ARL8AQ96BM9 186 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 GPR87Q9BY21 358 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 KCTD10Q9H3F6 313 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 SPC25Q9HBM1 224 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 NCDNQ9UBB6 729 aa4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 AQRO60306 1485 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P12-201ENST00000438745 ZNF202O95125 648 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 ENPP1P22413 925 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 CTSSP25774 331 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 GZMKP49863 264 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 KLF10Q13118 480 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 CRHR2Q13324 411 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 CNGB1Q14028 1251 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 KCNK18Q7Z418 384 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 FAM83AQ86UY5 434 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 CMIPQ8IY22 773 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 OR5M3Q8NGP4 307 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 RAX2Q96IS3 184 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 PAWRQ96IZ0 340 aaKnown RBP4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 LSM14BQ9BX40 385 aaKnown RBP4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 CSRNP2Q9H175 543 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 KIF13AQ9H1H9 1805 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 VTA1Q9NP79 307 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 PRKAB1Q9Y478 270 aa4.59□□□□□ -1.67
HMGB3P12-201ENST00000438745 ABCC10Q5T3U5 1492 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 PHLDB1Q86UU1 1377 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 K7ESF4 209 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 SUV39H1O43463 412 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 GASTP01350 101 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 GYPEP15421 78 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 GNAT2P19087 354 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 MCM7P33993 719 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 MRPS9P82933 396 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms