RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FAM209AQ5JX71 171 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 TMEM240Q5SV17 173 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SPATA1Q5VX52 437 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLFN13Q68D06 897 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 MBLAC2Q68D91 279 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 TRMT10BQ6PF06 316 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 BRINP3Q76B58 766 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 FASTKD5Q7L8L6 764 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 CATIPQ7Z7H3 387 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 MYLK4Q86YV6 388 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 AHI1Q8N157 1196 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 FAM43AQ8N2R8 423 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 ARL10Q8N8L6 244 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 DNERQ8NFT8 737 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 IPCEF1Q8WWN9 437 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 CENPTQ96BT3 561 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 FUBP3Q96I24 572 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 YTHDC1Q96MU7 727 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZMAT2Q96NC0 199 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 AIFM3Q96NN9 605 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 MAP3K14Q99558 947 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC13A1Q9BZW2 595 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SEMA4AQ9H3S1 761 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 ATP6V0A4Q9HBG4 840 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 ZCCHC17Q9NP64 241 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 PPARGC1AQ9UBK2 798 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 GIT1Q9Y2X7 761 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 A0A1W2PQH9 124 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 SYNDIG1LA6NDD5 238 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 A6NNZ2 444 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 AREL1O15033 823 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 CYP7B1O75881 506 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 LTFP02788 710 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 MYBL2P10244 700 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 BPIP17213 487 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 IARSP41252 1262 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 CR1LQ2VPA4 569 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 CDCA2Q69YH5 1023 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 FAAH2Q6GMR7 532 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 TLDC1Q6P9B6 456 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 RTL10Q7L3V2 364 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 LRRC47Q8N1G4 583 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 C19orf47Q8N9M1 422 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 ACRBPQ8NEB7 543 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 DPF3Q92784 378 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 SNX21Q969T3 373 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 PPP1R14AQ96A00 147 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 MBD6Q96DN6 1003 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 RSRC1Q96IZ7 334 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 TTC1Q99614 292 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 MRPL4Q9BYD3 311 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 WDR12Q9GZL7 423 aaKnown RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 ABCG4Q9H172 646 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 BARX1Q9HBU1 254 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 NKIRAS2Q9NYR9 191 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 DNM3Q9UQ16 869 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 AKT3Q9Y243 479 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC12A7Q9Y666 1083 aa4.2□□□□□ -1.74
HMGB1P12-201ENST00000438594 PATE3B3GLJ2 98 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 K7ESF4 209 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 KPNA6O60684 536 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 TIPRLO75663 272 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 MT-CO1P00395 513 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 XPAP23025 273 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 RECQLP46063 649 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 RPL11P62913 178 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ABHD18Q0P651 414 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 NFATC3Q12968 1075 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 PPP2R5CQ13362 524 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 R3HDM1Q15032 1099 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 E2F5Q15329 346 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 PCBP2Q15366 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 PKN2Q16513 984 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 DDB1Q16531 1140 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 INF2Q27J81 1249 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ANKRD45Q5TZF3 282 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CPLX2Q6PUV4 134 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 B3GNT9Q6UX72 402 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CYP26C1Q6V0L0 522 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CEP68Q76N32 757 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 RASGRP2Q7LDG7 609 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 GPR155Q7Z3F1 870 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 NBPF5PQ86XG9 351 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 KLHL36Q8N4N3 616 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ARHGEF39Q8N4T4 335 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 MYCT1Q8N699 235 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 TEX9Q8N6V9 391 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 Q8TCH9 128 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 AFAP1L1Q8TED9 768 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 ATP6V1E2Q96A05 226 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 TOE1Q96GM8 510 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 CCDC138Q96M89 665 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 GNRHR2Q96P88 292 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 IWS1Q96ST2 819 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 MMP19Q99542 508 aa4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 BARD1Q99728 777 aaKnown RBP4.19□□□□□ -1.74
HMGB1P12-201ENST00000438594 UNC45AQ9H3U1 944 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms