RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 GLIS3Q8NEA6 775 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 BADQ92934 168 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 C1orf112Q9NSG2 853 aa20.16■□□□□ 0.82
HDAC6-208ENST00000438518 MICAL3Q7RTP6 2002 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 ABHD14A-ACY1A0A1B0GW23 586 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 CCDC192P0DO97 292 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 BMP6P22004 513 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 GARTP22102 1010 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 FGFR4P22455 802 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 PROZP22891 400 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-208ENST00000438518 LRRC63Q05C16 580 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 IKBKEQ14164 716 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 NFIL3Q16649 462 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 ZSCAN23Q3MJ62 389 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 MPZL3Q6UWV2 235 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 C12orf56Q8IXR9 622 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 TARS2Q9BW92 718 aaKnown RBP20.15■□□□□ 0.82
HDAC6-208ENST00000438518 PTPRHQ9HD43 1115 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-208ENST00000438518 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 STYXL1Q9Y6J8 313 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 ZMYM2Q9UBW7 1377 aa20.15■□□□□ 0.82
HDAC6-208ENST00000438518 BICDL2A1A5D9 508 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 CLDN3O15551 220 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 B4GALT5O43286 388 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 CALUO43852 315 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-208ENST00000438518 EDN1P05305 212 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 SYN1P17600 705 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 KCNA1Q09470 495 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 MYBPC2Q14324 1141 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 DSC3Q14574 896 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 KYAT1Q16773 422 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 ISM2Q6H9L7 571 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 TWF2Q6IBS0 349 aaKnown RBP20.14■□□□□ 0.81
HDAC6-208ENST00000438518 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 NELFCDQ8IXH7 590 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 SMYD4Q8IYR2 804 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-208ENST00000438518 HACE1Q8IYU2 909 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 TSG101Q99816 390 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 OSBPL7Q9BZF2 842 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 TSPYL2Q9H2G4 693 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-208ENST00000438518 KCTD10Q9H3F6 313 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 TMX1Q9H3N1 280 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 PDZD7Q9H5P4 517 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 RGS18Q9NS28 235 aa20.14■□□□□ 0.81
HDAC6-208ENST00000438518 TGFB1I1O43294 461 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 LDHAP00338 332 aaKnown RBP20.13■□□□□ 0.81
HDAC6-208ENST00000438518 MCF2P10911 925 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 CCNE1P24864 410 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 HOXD13P35453 343 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 MCL1Q07820 350 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 PAK1Q13153 545 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 NOLC1Q14978 699 aaKnown RBP eCLIP20.13■□□□□ 0.81
HDAC6-208ENST00000438518 EDRF1Q3B7T1 1238 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 ZNF568Q3ZCX4 644 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 TCHPQ9BT92 498 aa20.13■□□□□ 0.81
HDAC6-208ENST00000438518 TRIM6Q9C030 488 aaPredicted RBP20.13■□□□□ 0.81
HDAC6-208ENST00000438518 MTIF3Q9H2K0 278 aaKnown RBP20.13■□□□□ 0.81
HDAC6-208ENST00000438518 SYCE3A1L190 88 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 PPP1R3GB7ZBB8 358 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 ZNF623O75123 536 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 CAVIN2O95810 425 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 ERCC5P28715 1186 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-208ENST00000438518 POU5F1Q01860 360 aaKnown RBP20.12■□□□□ 0.81
HDAC6-208ENST00000438518 TYRO3Q06418 890 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 DPCR1Q3MIW9 517 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 ARMCX5Q6P1M9 558 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 SLC24A5Q71RS6 500 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 SLC9A9Q8IVB4 645 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 RSPH1Q8WYR4 309 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 P2RX5Q93086 422 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 CPB2Q96IY4 423 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 ADAM2Q99965 735 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 NAT10Q9H0A0 1025 aaKnown RBP20.12■□□□□ 0.81
HDAC6-208ENST00000438518 AGPAT3Q9NRZ7 376 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 FAM105AQ9NUU6 356 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 MAPK8IP1Q9UQF2 711 aa20.12■□□□□ 0.81
HDAC6-208ENST00000438518 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 A0A0U1RQF3 1178 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 ABLIM1O14639 778 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 FGBP02675 491 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 RPL13P26373 211 aaKnown RBP20.11■□□□□ 0.81
HDAC6-208ENST00000438518 ZCWPW2Q504Y3 356 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 POMGNT1Q8WZA1 660 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 VWCEQ96DN2 955 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 FUCA2Q9BTY2 467 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 CDT1Q9H211 546 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 ELAC1Q9H777 363 aaKnown RBP20.11■□□□□ 0.81
HDAC6-208ENST00000438518 KIAA1586Q9HCI6 787 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 ANKFY1Q9P2R3 1169 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
HDAC6-208ENST00000438518 A0A0B4J269 797 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 TTLL13PA6NNM8 815 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 OGTO15294 1046 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 EOMESO95936 686 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 CD44P16070 742 aaKnown RBP20.1■□□□□ 0.81
HDAC6-208ENST00000438518 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms