RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 EMILIN2Q9BXX0 1053 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 ADAM7Q9H2U9 754 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 AGPAT5Q9NUQ2 364 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 TBC1D13Q9NVG8 400 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 DBR1Q9UK59 544 aaKnown RBP8.66□□□□□ -1.02
VPS50-203ENST00000436177 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 TRIOO75962 3097 aa8.66□□□□□ -1.02
VPS50-203ENST00000436177 ZFHX2Q9C0A1 2572 aaPredicted RBP8.66□□□□□ -1.02
VPS50-203ENST00000436177 IGKV6-21A0A0C4DH24 114 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 TBX3O15119 743 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 CLASP2O75122 1294 aaKnown RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 NR1I2O75469 434 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 URODP06132 367 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 YWHABP31946 246 aaKnown RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 KRT2P35908 639 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 NPEPPSP55786 919 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 LAMTOR4Q0VGL1 99 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 ATAT1Q5SQI0 421 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 PPP4R3AQ6IN85 833 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 SRGAP1Q7Z6B7 1085 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 DDX53Q86TM3 631 aaKnown RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 KSR1Q8IVT5 923 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 UBALD2Q8IYN6 164 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 RNF149Q8NC42 400 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 KREMEN2Q8NCW0 462 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 PRPF31Q8WWY3 499 aaKnown RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 AUTS2Q8WXX7 1259 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 TMEM143Q96AN5 459 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 ACSF2Q96CM8 615 aaPredicted RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 IGSF21Q96ID5 467 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 PHF20Q9BVI0 1012 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 TRIM6Q9C030 488 aaPredicted RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 ZBP1Q9H171 429 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 IRF2BPLQ9H1B7 796 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 S1PR5Q9H228 398 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 MFSD1Q9H3U5 465 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 ZSWIM4Q9H7M6 989 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 RSAD1Q9HA92 442 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 KCNMB3Q9NPA1 279 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 ORC3Q9UBD5 711 aaPredicted RBP8.65□□□□□ -1.02
VPS50-203ENST00000436177 VAV3Q9UKW4 847 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 C5orf42Q9H799 3197 aa8.65□□□□□ -1.02
VPS50-203ENST00000436177 TECTAO75443 2155 aa8.65□□□□□ -1.03
VPS50-203ENST00000436177 MYH9P35579 1960 aaKnown RBP8.64□□□□□ -1.03
VPS50-203ENST00000436177 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 INO80B-WBP1J3KQ70 363 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 EML1O00423 815 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 LCE2BO14633 110 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 ASAP2O43150 1006 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 ZNF623O75123 536 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 SSBP05455 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS50-203ENST00000436177 CTSAP10619 480 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 ITGA4P13612 1032 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 KLRC2P26717 231 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 SLC11A1P49279 550 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 CYP4A11Q02928 519 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 SCRN1Q12765 414 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 MXD4Q14582 209 aaPredicted RBP8.64□□□□□ -1.03
VPS50-203ENST00000436177 LAPTM4AQ15012 233 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 PCBP1Q15365 356 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS50-203ENST00000436177 EPHA7Q15375 998 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 CALCRLQ16602 461 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 TMEM132AQ24JP5 1023 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 KIAA1841Q6NSI8 718 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 CCDC149Q6ZUS6 474 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 TPH2Q8IWU9 490 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 C4orf19Q8IY42 314 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 CNNM3Q8NE01 707 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 POMKQ9H5K3 350 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 DHX33Q9H6R0 707 aaKnown RBP8.64□□□□□ -1.03
VPS50-203ENST00000436177 SFXN1Q9H9B4 322 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 UBN1Q9NPG3 1134 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
VPS50-203ENST00000436177 DPP7Q9UHL4 492 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 SORCS3Q9UPU3 1222 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 FAN1Q9Y2M0 1017 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 KIAA1671Q9BY89 1806 aa8.64□□□□□ -1.03
VPS50-203ENST00000436177 EVPLQ92817 2033 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 C2CD4DB7Z1M9 353 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 M0R2N6 131 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 C2CD2LO14523 706 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 EDIL3O43854 480 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 NEMFO60524 1076 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 PFKFB2O60825 505 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 OFD1O75665 1012 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 STBD1O95210 358 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 ALDH2P05091 517 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 ADH1AP07327 375 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 GALTP07902 379 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 WEE2P0C1S8 567 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 EPCAMP16422 314 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 RFX1P22670 979 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 AK2P54819 239 aa8.63□□□□□ -1.03
VPS50-203ENST00000436177 ANAPC15P60006 121 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms