RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NCKAP1LP55160 1127 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 GPR153Q6NV75 609 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 GLB1LQ6UWU2 654 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 TMEM161BQ8NDZ6 487 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
TREX1-201ENST00000433541 BLZF1Q9H2G9 400 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 ANKFY1Q9P2R3 1169 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 A0A1B0GUA9 196 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 GCNT3O95395 438 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 MAPTP10636 758 aaKnown RBP17.04■□□□□ 0.32
TREX1-201ENST00000433541 ABCD1P33897 745 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 CTNNB1P35222 781 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 LIG4P49917 911 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 FAM189BP81408 668 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 TAP1Q03518 808 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
TREX1-201ENST00000433541 ZBTB33Q86T24 672 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
TREX1-201ENST00000433541 URGCPQ8TCY9 931 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
TREX1-201ENST00000433541 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 HES2Q9Y543 173 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 IPPQ9Y573 584 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 CITO14578 2027 aa17.04■□□□□ 0.32
TREX1-201ENST00000433541 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 HNRNPDLO14979 420 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 ACTN4O43707 911 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 SCP2P22307 547 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 CASP1P29466 404 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 COASYQ13057 564 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 NTPCRQ9BSD7 190 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 MRPL9Q9BYD2 267 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 TTYH1Q9H313 450 aaPredicted RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 SEMA6BQ9H3T3 888 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 NXF3Q9H4D5 531 aaKnown RBP17.03■□□□□ 0.32
TREX1-201ENST00000433541 PRDM12Q9H4Q4 367 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 RSAD1Q9HA92 442 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 HPSEQ9Y251 543 aa17.03■□□□□ 0.32
TREX1-201ENST00000433541 TRIP11Q15643 1979 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 ZNF202O95125 648 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 EDN1P05305 212 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 ZC2HC1CQ53FD0 456 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 TAS1R3Q7RTX0 852 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 ZNF598Q86UK7 904 aaKnown RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 SYCP3Q8IZU3 236 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 LRRC43Q8N309 656 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 ZNF689Q96CS4 500 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 PAGE5Q96GU1 130 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 FAM193BQ96PV7 902 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 GAS2L1Q99501 681 aaPredicted RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 ACO2Q99798 780 aaKnown RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 C17orf80Q9BSJ5 609 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 EXOC1Q9NV70 894 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 TBX20Q9UMR3 447 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 TNFSF13BQ9Y275 285 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 GDAQ9Y2T3 454 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.32
TREX1-201ENST00000433541 MRPL42Q9Y6G3 142 aaKnown RBP17.02■□□□□ 0.32
TREX1-201ENST00000433541 MEIS3P2A8K0S8 358 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 ZNF623O75123 536 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 AKAP5P24588 427 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 OSTNP61366 133 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 CUL4BQ13620 913 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 NOMO2Q5JPE7 1267 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 TMEM192Q8IY95 271 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 CRIPAKQ8N1N5 446 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 SMG8Q8ND04 991 aaKnown RBP17.01■□□□□ 0.31
TREX1-201ENST00000433541 SAMD11Q96NU1 681 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms