RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PBX1P40424 430 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KRT71Q3SY84 523 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KAZNQ674X7 775 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ATG16L1Q676U5 607 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L2Q6R6M4 530 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SH3TC2Q8TF17 1288 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PEX13Q92968 403 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 UIMC1Q96RL1 719 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PAGR1Q9BTK6 254 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ATP8A1Q9Y2Q0 1164 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 IQANK1A0A1B0GTG1 560 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 M0QZ92 97 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MEIS1O00470 390 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ANXA1P04083 346 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PLS3P13797 630 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 STX2P32856 288 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 FMO5P49326 533 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PSEN1P49768 467 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CASP8Q14790 479 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SNF8Q96H20 258 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 C8orf37Q96NL8 207 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KLC2Q9H0B6 622 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CCPG1Q9ULG6 757 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KIAA1024Q9UPX6 916 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SF3B1O75533 1304 aaKnown RBP eCLIP4.02□□□□□ -1.776e-6■■■■■ 103.4
SHPRH-205ENST00000433355 ADORA1P30542 326 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 YARSP54577 528 aaKnown RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ELAVL2Q12926 359 aaKnown RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MIGA1Q8NAN2 632 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TNFRSF25Q93038 417 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 YY1AP1Q9H869 796 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TXNDC16Q9P2K2 825 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RASGRF2O14827 1237 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MCF2LO15068 1137 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 COG7P83436 770 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RASSF7Q02833 373 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MORF4L2Q15014 288 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ZSCAN26Q16670 478 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KBTBD12Q3ZCT8 623 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 E4F1Q66K89 784 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 BBS5Q8N3I7 341 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF341Q9BYN7 854 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PCYOX1Q9UHG3 505 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RRN3P2A6NIE6 340 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PHACTR2O75167 634 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RTN2O75298 545 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KPNA1P52294 538 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC15Q0P6D6 951 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 EP400NLQ6ZTU2 488 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 LINC00523Q86TU6 105 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TBC1D16Q8TBP0 767 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 OSBPL9Q96SU4 736 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 NIF3L1Q9GZT8 377 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ISCUQ9H1K1 167 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TLR7Q9NYK1 1049 aaKnown RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 DICER1Q9UPY3 1922 aaKnown RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CASP8AP2Q9UKL3 1982 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L5A8MUK1 530 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ALDH1A1P00352 501 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 COL6A1P12109 1028 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 IRX3P78415 501 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 MAP2K1Q02750 393 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 RIPK1Q13546 671 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 PKP1Q13835 747 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 ITIH4Q14624 930 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 TTLL4Q14679 1199 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CDKL3Q8IVW4 592 aaPredicted RBP4.02□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC197Q8NCU1 140 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 SEC14L1Q92503 715 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 KIF9Q9HAQ2 790 aa4.02□□□□□ -1.77
SHPRH-205ENST00000433355 LTBP1Q14766 1721 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 HSPA9P38646 679 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 RANBP1P43487 201 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NOP2P46087 812 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NUGGCQ68CJ6 796 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SYT10Q6XYQ8 523 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SND1Q7KZF4 910 aaKnown RBP eCLIP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 RRAGAQ7L523 313 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SEPT12Q8IYM1 358 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ABRAQ8N0Z2 381 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 OTUD6BQ8N6M0 293 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 DEPTORQ8TB45 409 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CALML6Q8TD86 181 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PTCD2Q8WV60 388 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 DHX33Q9H6R0 707 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 VPS18Q9P253 973 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SERTAD1Q9UHV2 236 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 DERAQ9Y315 318 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 K7ENM7 598 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAPK8P45983 427 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LMAN1P49257 510 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 DCUN1D2Q6PH85 259 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PARP9Q8IXQ6 854 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 USP38Q8NB14 1042 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TGFBRAP1Q8WUH2 860 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC126Q96EE4 140 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms