RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 RNF166Q96A37 237 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 KAZALD1Q96I82 304 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 UHRF1Q96T88 793 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 BICC1Q9H694 974 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 RCOR1Q9UKL0 485 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 UTYO14607 1347 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 KINO60870 393 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 KCNA2P16389 499 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 LPOP22079 712 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SCRN1Q12765 414 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 NNTQ13423 1086 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 PDE1CQ14123 709 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 PLCB4Q15147 1175 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 DHCR24Q15392 516 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 MFSD4BQ5TF39 518 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 PIK3R6Q5UE93 754 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 IQSEC1Q6DN90 963 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 NAA16Q6N069 864 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CXorf57Q6NSI4 855 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 TAB3Q8N5C8 712 aaPredicted RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SGCZQ96LD1 299 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 LLPHQ9BRT6 129 aaKnown RBP6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 ITM2CQ9NQX7 267 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 MAN1C1Q9NR34 630 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 SUSD2Q9UGT4 822 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 CRYL1Q9Y2S2 319 aa6.83□□□□□ -1.32
NIPAL3-205ENST00000432012 ANO9A1A5B4 782 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 MEIS3P2A8K0S8 358 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 J3QW42 95 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ERVK-21P61565 698 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 MRPS5P82675 430 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 SMAD3P84022 425 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 GBX1Q14549 363 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 HLFQ16534 295 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ZNF423Q2M1K9 1284 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PROSER3Q2NL68 480 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 CFAP100Q494V2 611 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 TMEM31Q5JXX7 168 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 LLGL2Q6P1M3 1020 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 HFE2Q6ZVN8 426 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 NAT8LQ8N9F0 302 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 LRRN4CLQ8ND94 238 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ENGASEQ8NFI3 743 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 LINS1Q8NG48 757 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ASB2Q96Q27 587 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 FTOQ9C0B1 505 aaKnown RBP eCLIP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 NAT10Q9H0A0 1025 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 SIL1Q9H173 461 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 IFT22Q9H7X7 185 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 IMPACTQ9P2X3 320 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ZMYND8Q9ULU4 1186 aaPredicted RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 MYPNQ86TC9 1320 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 TRIM64A6NGJ6 449 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 TRIM64BA6NI03 449 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 C9IYK1 514 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 BRINP1O60477 761 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 RARAP10276 462 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PABPC1P11940 636 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 CTSOP43234 321 aaPredicted RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 MECOMQ03112 1051 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 SUSD4Q5VX71 490 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ATL3Q6DD88 541 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 MZT2BQ6NZ67 158 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ZNF34Q8IZ26 560 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 AOPEPQ8N6M6 819 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 NXPE3Q969Y0 559 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PNMA5Q96PV4 448 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 USP28Q96RU2 1077 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PTPN18Q99952 460 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 CHCHD6Q9BRQ6 235 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 UTP14AQ9BVJ6 771 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 ZNF446Q9NWS9 450 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 THEGQ9P2T0 379 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 EIF2B4Q9UI10 523 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 POLHQ9Y253 713 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA9Q9Y5G4 932 aaKnown RBP6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA8Q9Y5G5 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA7Q9Y5G6 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA6Q9Y5G7 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA3Q9Y5H0 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 PCDHGA2Q9Y5H1 932 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
NIPAL3-205ENST00000432012 A0A087WWV3 80 aa6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 TRAV20A0A0B4J274 112 aa6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 SLC22A31A6NKX4 558 aa6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 PFKFB2O60825 505 aa6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 ZIC2O95409 532 aaPredicted RBP6.81□□□□□ -1.32
NIPAL3-205ENST00000432012 CYP21A2P08686 494 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms