RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 GPIHBP1Q8IV16 184 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SYCE1Q8N0S2 351 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SPATA4Q8NEY3 305 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 SLC30A5Q8TAD4 765 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 TAF4BQ92750 862 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 PCIF1Q9H4Z3 704 aa13.92□□□□□ -0.18
DDX56-204ENST00000431640 PFASO15067 1338 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 MYH10P35580 1976 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 TRIM49P0CI25 452 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 TRIM49CP0CI26 452 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 TNFAIP3P21580 790 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
DDX56-204ENST00000431640 NPTX2P47972 431 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
DDX56-204ENST00000431640 XKR3Q5GH77 459 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 WDR78Q5VTH9 848 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 MAP4K3Q8IVH8 894 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 UBE2Q2Q8WVN8 375 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 PBKQ96KB5 322 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 UBXN6Q9BZV1 441 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 PDLIM7Q9NR12 457 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 MCM3APO60318 1980 aa13.91□□□□□ -0.18
DDX56-204ENST00000431640 EMSYQ7Z589 1322 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.181e-7■■■■□ 23.6
DDX56-204ENST00000431640 SASH3O75995 380 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 RGS20O76081 388 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 STBD1O95210 358 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 CNGA1P29973 690 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 GTF2H1P32780 548 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 ACTR2P61160 394 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 KIF22Q14807 665 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 RPS6KA1Q15418 735 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 ANKRD35Q8N283 1001 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 U2AF1L4Q8WU68 220 aaKnown RBP13.9□□□□□ -0.18
DDX56-204ENST00000431640 MMP19Q99542 508 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 CBWD1Q9BRT8 395 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 SELENOOQ9BVL4 669 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 PACSIN1Q9BY11 444 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 MROH8Q9H579 483 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 VIPAS39Q9H9C1 493 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 GPRC5CQ9NQ84 441 aa13.9□□□□□ -0.18
DDX56-204ENST00000431640 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 ATG7O95352 703 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 ADORA2AP29274 412 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 COPB2P35606 906 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 MAP2K2P36507 400 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 ALDH5A1P51649 535 aaPredicted RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 GRB14Q14449 540 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 BRDTQ58F21 947 aaPredicted RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 KCNN1Q92952 543 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 CFHR5Q9BXR6 569 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 ATP6V0A4Q9HBG4 840 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 KIAA1586Q9HCI6 787 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
DDX56-204ENST00000431640 AJAP1Q9UKB5 411 aaPredicted RBP13.89□□□□□ -0.19
DDX56-204ENST00000431640 CENPFP49454 3210 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TMEM150BA6NC51 233 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 KIAA0391O15091 583 aaKnown RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 NCK2O43639 380 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 ZNF862O60290 1169 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TRPA1O75762 1119 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 GARTP22102 1010 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 EDNRBP24530 442 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 CCNA1P78396 465 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 PPP3CAQ08209 521 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 CASP8Q14790 479 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 FAM81BQ96LP2 452 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 GPR88Q9GZN0 384 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 DOCK5Q9H7D0 1870 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 CXCR5P32302 372 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 GCLMP48507 274 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms