RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MYPNQ86TC9 1320 aa5.72□□□□□ -1.49
PTPN4-203ENST00000430976 PROM1O43490 865 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 PSIP1O75475 530 aaKnown RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 ITGALP20701 1170 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 SERPINB6P35237 376 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 KPNA1P52294 538 aaPredicted RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 EXOSC10Q01780 885 aaKnown RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 ZMYND11Q15326 602 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 Q5PR19 223 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 LIN54Q6MZP7 749 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 MIS18BP1Q6P0N0 1132 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 AAGABQ6PD74 315 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 TMC5Q6UXY8 1006 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 AGMOQ6ZNB7 445 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 RASEFQ8IZ41 740 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 SCAIQ8N9R8 606 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 KCNH5Q8NCM2 988 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 PSD4Q8NDX1 1056 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 FBXO30Q8TB52 745 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 MYCBPAPQ8TBZ2 947 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 DIS3LQ8TF46 1054 aaKnown RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 COG1Q8WTW3 980 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 UPF1Q92900 1129 aaKnown RBP eCLIP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 PHF21AQ96BD5 680 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 CHCHD6Q9BRQ6 235 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 NAA15Q9BXJ9 866 aaKnown RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 SLITRK6Q9H5Y7 841 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 HAUS4Q9H6D7 363 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 PKD2L2Q9NZM6 624 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 RNF112Q9ULX5 631 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 MED16Q9Y2X0 877 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 PCDHGA2Q9Y5H1 932 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 SLC30A1Q9Y6M5 507 aa5.71□□□□□ -1.49
PTPN4-203ENST00000430976 BAZ1AQ9NRL2 1556 aaPredicted RBP5.71□□□□□ -1.49
PTPN4-203ENST00000430976 SYNJ2BP-COX16A0A087WUM0 186 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 H0YJX3 145 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 MTX2O75431 263 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 POLBP06746 335 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 CHN1P15882 459 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 CTNNB1P35222 781 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 EIF2B2P49770 351 aaKnown RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 PPP2R2AP63151 447 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 FOXK1P85037 733 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 LIPEQ05469 1076 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 SPAG1Q07617 926 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 MCL1Q07820 350 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 LPIN1Q14693 890 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TMEM266Q2M3C6 531 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 C1orf94Q6P1W5 598 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 BEND4Q6ZU67 534 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 IKBIPQ70UQ0 350 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 OTOP3Q7RTS5 596 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 KRT26Q7Z3Y9 468 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TTC13Q8NBP0 860 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 SLC16A10Q8TF71 515 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 GRK7Q8WTQ7 553 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 LEO1Q8WVC0 666 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TRIM47Q96LD4 638 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 PIP5K1AQ99755 562 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 STMN4Q9H169 189 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TPK1Q9H3S4 243 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 C12orf49Q9H741 205 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 ABCB6Q9NP58 842 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 DNAJB4Q9UDY4 337 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TMCO1Q9UM00 188 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 PTPRCP08575 1304 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 KCNJ18B7U540 433 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 POLR2DO15514 142 aaKnown RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 ASMTLO95671 621 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 MBD3O95983 291 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 CKBP12277 381 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 CSF2RAP15509 400 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 CBX5P45973 191 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 GDI2P50395 445 aaKnown RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 KRT17Q04695 432 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 LAPTM5Q13571 262 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 RAPSNQ13702 412 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 KCNJ12Q14500 433 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 STARD3Q14849 445 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF124Q15973 351 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 NFIL3Q16649 462 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 DEPDC1Q5TB30 811 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 TMEM132EQ6IEE7 984 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 PPP1R42Q7Z4L9 355 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 AKAP1Q92667 903 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 RELTQ969Z4 430 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 MAML3Q96JK9 1138 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 C8orf76Q96K31 380 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 DNAJC1Q96KC8 554 aaKnown RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 AK8Q96MA6 479 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 HS6ST2Q96MM7 605 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 USP26Q9BXU7 913 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 GPR34Q9UPC5 381 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 MRPS7Q9Y2R9 242 aaKnown RBP5.71□□□□□ -1.5
PTPN4-203ENST00000430976 AXIN2Q9Y2T1 843 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 AP3M1Q9Y2T2 418 aa5.71□□□□□ -1.5
PTPN4-203ENST00000430976 F8W8V4 182 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms