RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 TRIP13Q15645 432 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CMPK2Q5EBM0 449 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 SNX30Q5VWJ9 437 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 BICDL1Q6ZP65 573 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 PIGBQ92521 554 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 RAB34Q9BZG1 259 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 PCYOX1Q9UHG3 505 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 COL4A1P02462 1669 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 ANKRD36CQ5JPF3 1778 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 POTECB2RU33 542 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CLIC2O15247 247 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 KRT36O76013 467 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CHRNB2P17787 502 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 KLRK1P26718 216 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CALCOCO2Q13137 446 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 CERKLQ49MI3 558 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 DSTYKQ6XUX3 929 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 DTX3LQ8TDB6 740 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 USP20Q9Y2K6 914 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 ZNF804BA4D1E1 1349 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 PAPPAQ13219 1627 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 TP73O15350 636 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 PLA2G4BP0C869 781 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 PYGMP11217 842 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 ALAS1P13196 640 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 CTNNA2P26232 953 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 COILP38432 576 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 VHLP40337 213 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 SCNN1BP51168 640 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 WASHC2DQ5SRD0 308 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 ARHGEF18Q6ZSZ5 1173 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 TRMT10CQ7L0Y3 403 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 APLFQ8IW19 511 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 TTLL1O95922 423 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 HOXD13P35453 343 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 STRN3Q13033 797 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 UBE2SQ16763 222 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 ZNF568Q3ZCX4 644 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 TAF1BQ53T94 588 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 INPP5DQ92835 1189 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 BICD1Q96G01 975 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 DCLRE1BQ9H816 532 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 NAALADL1Q9UQQ1 740 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 USH1CQ9Y6N9 552 aa11.87□□□□□ -0.51
SEMA4D-209ENST00000429836 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 MAPK13O15264 365 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ATP5HO75947 161 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ATP5DP30049 168 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 GSTT1P30711 240 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 VPS41P49754 854 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 YARSP54577 528 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 PDIA5Q14554 519 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 MESDQ14696 234 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 DRAP1Q14919 205 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ZC3H3Q8IXZ2 948 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 KLHL23Q8NBE8 558 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 C1orf54Q8WWF1 131 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 HAS1Q92839 578 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 MIPEPQ99797 713 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 CTTNBP2NLQ9P2B4 639 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 STOML1Q9UBI4 398 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 NUMBLQ9Y6R0 609 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 NUP98P52948 1817 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 THAP12O43422 761 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 CYP11B2P19099 503 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 LMNB1P20700 586 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 SOX5P35711 763 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ERFP50548 548 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 TMED2Q15363 201 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 EDRF1Q3B7T1 1238 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
SEMA4D-209ENST00000429836 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms