RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TNFSF9P41273 254 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 DNM2P50570 870 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 ACLYP53396 1101 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 LRMPQ12912 555 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 STRN3Q13033 797 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 TFDP1Q14186 410 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 ARHGEF6Q15052 776 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 DCAF17Q5H9S7 520 aaPredicted RBP9.7□□□□□ -0.86
SMC6-204ENST00000428868 CRELD2Q6UXH1 353 aaPredicted RBP9.7□□□□□ -0.86
SMC6-204ENST00000428868 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 ZBTB33Q86T24 672 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
SMC6-204ENST00000428868 CEP120Q8N960 986 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 XXYLT1Q8NBI6 393 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 GOLGA5Q8TBA6 731 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 TMEM40Q8WWA1 233 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 POMGNT1Q8WZA1 660 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 SLC35C1Q96A29 364 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 MAP7D2Q96T17 732 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
SMC6-204ENST00000428868 NDST4Q9H3R1 872 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 TOPORSQ9NS56 1045 aaPredicted RBP9.7□□□□□ -0.86
SMC6-204ENST00000428868 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 GINS2Q9Y248 185 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 STYXL1Q9Y6J8 313 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 PTPRSQ13332 1948 aa9.7□□□□□ -0.86
SMC6-204ENST00000428868 A0A1W2PQ45 241 aaPredicted RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 A0A1W2PQY0 241 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 ASAP2O43150 1006 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 ZEB2O60315 1214 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 FAM189A1O60320 539 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 TSPAN1O60635 241 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 LRRN2O75325 713 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 GNA14O95837 355 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PTMAP06454 111 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 CCL5P13501 91 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 GARTP22102 1010 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PROZP22891 400 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 RPL13P26373 211 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 TMOD1P28289 359 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PHKA2P46019 1235 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 KCNH2Q12809 1159 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PTPRJQ12913 1337 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 SYCP1Q15431 976 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 SLC9C1Q4G0N8 1177 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 FILIP1LQ4L180 1135 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 PDE4DIPQ5VU43 2346 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 TCERG1LQ5VWI1 586 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 DPY19L2P1Q6NXN4 242 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 RNF180Q86T96 592 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 TMEM192Q8IY95 271 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 TMEM130Q8N3G9 435 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 ANKRD20A12PQ8NF67 263 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 CACTINQ8WUQ7 758 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 TMEM174Q8WUU8 243 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 FBXL18Q96ME1 805 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 DEFB118Q96PH6 123 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 CRACR2AQ9BSW2 395 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 MKNK1Q9BUB5 465 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 MRPL4Q9BYD3 311 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 NFKBIZQ9BYH8 718 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 C2orf40Q9H1Z8 148 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PTPRHQ9HD43 1115 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 PAK6Q9NQU5 681 aaPredicted RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 TRMT13Q9NUP7 481 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 CGNQ9P2M7 1197 aaKnown RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 ARMCX3Q9UH62 379 aaPredicted RBP9.69□□□□□ -0.86
SMC6-204ENST00000428868 CNTNAP2Q9UHC6 1331 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 SIK3Q9Y2K2 1263 aa9.69□□□□□ -0.86
SMC6-204ENST00000428868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMC6-204ENST00000428868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMC6-204ENST00000428868 ITIH6Q6UXX5 1313 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 A0A0B4J269 797 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 LRRIQ3A6PVS8 624 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 ACKR2O00590 384 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 MEFVO15553 781 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 AFPP02771 609 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 GYPCP04921 128 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CTSHP09668 335 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ARF4P18085 180 aaPredicted RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 MATR3P43243 847 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMC6-204ENST00000428868 ACOT2P49753 483 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 FXR1P51114 621 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMC6-204ENST00000428868 EFNA5P52803 228 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 ADKP55263 362 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 POU5F1BQ06416 359 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 CYP24A1Q07973 514 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 PPP3CAQ08209 521 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 RBL2Q08999 1139 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 BFSP1Q12934 665 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 PRPF4BQ13523 1007 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 ITGA7Q13683 1181 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 MYBPC2Q14324 1141 aa9.68□□□□□ -0.86
SMC6-204ENST00000428868 SNRNP35Q16560 246 aaKnown RBP9.68□□□□□ -0.86
SMC6-204ENST00000428868 MAPK6Q16659 721 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms