RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 TNPO2O14787 897 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 MAPK13O15264 365 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 NPM3O75607 178 aaKnown RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PLCG1P19174 1290 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 LIG3P49916 1009 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ADCY2Q08462 1091 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 IFT88Q13099 833 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SCARF1Q14162 830 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ATG9AQ7Z3C6 839 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 OTUD5Q96G74 571 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 BHMT2Q9H2M3 363 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 NHEJ1Q9H9Q4 299 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 UBA6A0AVT1 1052 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-208ENST00000428599 LINC00301Q8NCQ3 95 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 PHF21AQ96BD5 680 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 ZFYVE19Q96K21 471 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
CTNND1-208ENST00000428599 LMNAP02545 664 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 EIF4A3P38919 411 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ZBED6P86452 979 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 POU5F1BQ06416 359 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 CUL4AQ13619 759 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 RABL6Q3YEC7 729 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 PKN3Q6P5Z2 889 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 GPT2Q8TD30 523 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 UBE2Q2Q8WVN8 375 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ZFP42Q96MM3 310 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 HINFPQ9BQA5 517 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 FAM129AQ9BZQ8 928 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 VPS11Q9H270 941 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ZNRF3Q9ULT6 936 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 PCDHA13Q9Y5I0 950 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SRPRBQ9Y5M8 271 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 KRT8P05787 483 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 C2orf54Q08AI8 447 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 NME3Q13232 169 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SF3B3Q15393 1217 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 KLHL38Q2WGJ6 581 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 HEATR6Q6AI08 1181 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 GRAMD1CQ8IYS0 662 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ENAHQ8N8S7 591 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 RABGGTAQ92696 567 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 MRPL4Q9BYD3 311 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 ADORA2BP29275 332 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 C16orf72Q14CZ0 275 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SNX17Q15036 470 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 GRAMD1BQ3KR37 738 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SPATA2LQ8IUW3 424 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 CDKL3Q8IVW4 592 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 FMO2Q99518 471 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 PDE11AQ9HCR9 933 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 PODXLO00592 558 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 KDM1AO60341 852 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SPAG7O75391 227 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 CDC25BP30305 580 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 AP1B1Q10567 949 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 EFTUD2Q15029 972 aaKnown RBP eCLIP9.49□□□□□ -0.893e-8■■■■■ 29.5
CTNND1-208ENST00000428599 ALS2CLQ60I27 953 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 SYT2Q8N9I0 419 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-208ENST00000428599 RNF146Q9NTX7 359 aa9.49□□□□□ -0.89
CTNND1-208ENST00000428599 GSG1L2A8MUP6 293 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 KCNA2P16389 499 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 SKOR1P84550 965 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 FAM133BQ5BKY9 247 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 E4F1Q66K89 784 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 PGBD4Q96DM1 585 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 EHD2Q9NZN4 543 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 WARS2Q9UGM6 360 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 A8MXQ7 604 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ASAP2O43150 1006 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 DCTN3O75935 186 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 SERPIND1P05546 499 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 PSMA3P25788 255 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 GRIK1P39086 918 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CCDC15Q0P6D6 951 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 SLC9A5Q14940 896 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 AARS2Q5JTZ9 985 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 KCNV1Q6PIU1 500 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 TMEM270Q6UE05 265 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 APPL2Q8NEU8 664 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CNOT8Q9UFF9 292 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ANAPC7Q9UJX3 599 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms