RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 FGF13Q92913 245 aa12.98□□□□□ -0.33
DDX39B-209ENST00000428450 PGBD4Q96DM1 585 aa12.98□□□□□ -0.33
DDX39B-209ENST00000428450 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-209ENST00000428450 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
DDX39B-209ENST00000428450 KANSL3Q9P2N6 904 aa12.98□□□□□ -0.33
DDX39B-209ENST00000428450 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-209ENST00000428450 PCDHB2Q9Y5E7 798 aa12.98□□□□□ -0.33
DDX39B-209ENST00000428450 DSPP15924 2871 aaKnown RBP12.97□□□□□ -0.33
DDX39B-209ENST00000428450 F8W810 466 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 OATP04181 439 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 KCNA4P22459 653 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDX39B-209ENST00000428450 ZNF76P36508 570 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 CDC42EP1Q00587 391 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 PTH1RQ03431 593 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-209ENST00000428450 TARBP2Q15633 366 aaKnown RBP12.97□□□□□ -0.33
DDX39B-209ENST00000428450 ZNF852Q6ZMS4 543 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 B3GALT6Q96L58 329 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 FAM193BQ96PV7 902 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-209ENST00000428450 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 NRBP2Q9NSY0 501 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 NBEAQ8NFP9 2946 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 LAMA1P25391 3075 aa12.97□□□□□ -0.33
DDX39B-209ENST00000428450 DMXL2Q8TDJ6 3036 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 C1QTNF9BB2RNN3 333 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 CYP3A4P08684 503 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 C1QTNF9P0C862 333 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 PRKCEQ02156 737 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 KXD1Q9BQD3 176 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 CHRDQ9H2X0 955 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.33
DDX39B-209ENST00000428450 SMG1Q96Q15 3661 aaKnown RBP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 CNTNAP2Q9UHC6 1331 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 RALGAPA1Q6GYQ0 2036 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 HRO43593 1189 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 OR1G1P47890 313 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 LIMK1P53667 647 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 NAPAP54920 295 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 DSC1Q08554 894 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 UGCGQ16739 394 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 UBXN11Q5T124 520 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 CATSPER4Q7RTX7 472 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 KDF1Q8NAX2 398 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 MTA3Q9BTC8 594 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 PLA2G2FQ9BZM2 168 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 INO80BQ9C086 356 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 MRPS17Q9Y2R5 130 aaKnown RBP12.95□□□□□ -0.34
DDX39B-209ENST00000428450 WDR81Q562E7 1941 aa12.95□□□□□ -0.34
DDX39B-209ENST00000428450 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 SH2B2O14492 632 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-209ENST00000428450 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-209ENST00000428450 HOXA11P31270 313 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-209ENST00000428450 ADCY7P51828 1080 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 SIM2Q14190 667 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-209ENST00000428450 IL31Q6EBC2 164 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 PPP1R18Q6NYC8 613 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 POTEHQ6S545 545 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 KSR1Q8IVT5 923 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 FBXW11Q9UKB1 542 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 LAMA5O15230 3695 aa12.94□□□□□ -0.34
DDX39B-209ENST00000428450 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 WDR64B1ANS9 1081 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 STBD1O95210 358 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX39B-209ENST00000428450 CALM1P0DP23 149 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 CALM2P0DP24 149 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 CALM3P0DP25 149 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
DDX39B-209ENST00000428450 SRSF5Q13243 272 aaKnown RBP12.93□□□□□ -0.34
DDX39B-209ENST00000428450 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 UNQ6494/PRO21346Q6UXR6 183 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
DDX39B-209ENST00000428450 RHPN2Q8IUC4 686 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms